Gene Svir_01160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_01160 
Symbol 
ID8385454 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp121798 
End bp124476 
Gene Length2679 bp 
Protein Length892 aa 
Translation table11 
GC content71% 
IMG OID644974220 
Productpredicted ATPase 
Protein accessionYP_003132031 
Protein GI257054199 
COG category[R] General function prediction only 
COG ID[COG3903] Predicted ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGTCG CGAACGCGGG CCGCAGTGTC GACGTCGAAA CCCTCATCGA CGTGGCGTGG 
GAGCCGCACG AACTCCCGAG TAACCCGTTC GATTCCCTCA ACACGCGGAT CACCCGACTG
CGCACGCTGT TGGCCCCACA GGCCGATGTC AGCTGGTGCG CGGGCGGCTG TGTGCTGACG
GTGGACGCCG AGCGCGCCGA TGCCGTCCTT TTCGAACGGA TGGTGGAGGA GGCCCATTGG
TGTTCCGACC GGGAAGCGAT CACCGTGTTG GACCGCGCGT TGCGGCTGTG GCGGGGGGAC
CCGCTGCCGG ACCTGCGCCG CAACGGGCTC GAACACCCGG AGGGGGTGCG ACTGCGACAG
CTTCGGGCCC GGGCCGTGGA GGACCTCGCC GTGCGTGAAT TGAGGATCGG CGCGGTGGAG
GACGCGGCGA GTCGGCTGTT GGCTCTGTTG TCGGCCGAGC CGCTGCGGGA ACGCGCCTGC
GGTTACGCGA TGTGGGCGCT GCACCGCTTG GGCATGACCG CCGACGCCGT GACGTGCTAC
GACCAGCTCG TCGAGCGGTT GGAGGACGAG CTCGGCGAGG GGCCGAGCAC CGAACTGCGA
CAGACCTATC GTGCCGTCAC GGGTCGAGAG CCCACGCCGT CGGATCGGCC CACCGACCGC
ATACCCCTGG TCGGCCGCGG ACATGAACTG GCTCGGTTGT CCACGATGCT CGACCGTGAA
CGGATGGTGA CCGTGACCGG TCCTGCGGGC TGCGGGAAGA CCCGGCTCGT GTCGGCGGCA
CTGTCCACCA CGGATGTCCC CGTGACCTTG ATTCCTTTGT CCACATGCGA CGATTTCGGG
CTGTACGAGA AAGTGGCCGC CGCGGTGGGT CTGCACTCGC GCGGGCCCGA TGAGGGCACC
GACGACCTAC CCATGGTGCT CACCGAATAC CTCCGTGGCC GACGGCACAT CCTGGTGTTC
GACGGCTGTG AACACCTGCT CACGTCCGTA CGCGCACTCG TGCGGCGGAT CCGGGCCCGG
TGTCCGGATG TCACCGTGGT GGCGACCAAC CGGGTCAGGC TGGGCCTCGC GGGTGAGCGG
GTGCTCCCGC TCGGGTCGCT GGCCCGGGAC GGTGTGCGTG ACCCCTTGCT GTCCCGGGCC
GGGAAGCTGT TCCTCGACCG CGCCCACCGG GTACGGCCCG AGTTCCCCTC CACCGACGAC
GAGGCCCACC TCGCGCGGGA CCTGCTGCGC CGAGCGGACG GCCTGCCGTT GACGGTGGAA
CTGTTGGCCG CTCGAGCCAC CGGGAACGAC CCCGCACTTC CGCGACCGTG GCCGTCCGAC
CTCGTCGAAT GGTCGTACGA GCGGCTCTCG GGGTCACGAC GGGAGCTGCT CGGCGCGTTC
ACGGTGTTCG ACGGCGACGT CGACCCCTCC GCGATCGAGT CCGTAGTGGA CACCGATGGT
GACGCAAGCG ACGCTCTCAC CGAACTGGTC CGTACGGGCC TGCTCACGAC CGTCGACACC
GAGACCGGCA CCCGCTATCG GACACCCGAC CTGGTGCGTC GCATCGTCAC GCGCCGGTTC
GCCGGTACCG ATTCGGAGCG CAAGATCCGG CAGCGACACG CGCTGTGGTG CGCCGATCTG
ATCACCGACG CGGTGGCGTC GAACGACGAC CCCTCGGCGT TCGACCTGCT GTGCCGGATG
GAGGACGAGG TGTGCTCCGC GCTGCGGTGG GCGATGTCCG AGGAACCCGG TCTCGCGGCC
GACCTGAGCG GGCAGATCGG ACTGCTCACG GCGTACCGTC CCCGGGCGCG GCTGCTGCCG
TGGCAGCTCA GGGTGGCCCG TGACCCGGAC CCGAGGCTGG CCCAACACGC CCCGGCCACG
GCGTCGGGTG CGGACGCCGC CCTCCGTTGC GGCCTGTCCG AGGAGGGCTT ACGCCTCGCG
GCCAGGGCCG CCGAACTCGC CACCACCGCG CAACATCGCT GTTCCGCCGT GCGCGCTCTG
ATCTGCGGCT ACCACGACCT CGGTGACGAC GACCGCACCG CCGAGATGTG TCACGAGCTG
CTCGACTCGG TGGACGTGCC GGACTCCGGC AACGCCGACG CCCACGCCTT CCTGGCTCTG
CTCGCGGCCC GTGGCGGCCG CCCTCGGGAG GCGTTACGGC ACGCCGAGAC GGCGGCCCGG
TACGCTCGCG CGTCGGGGTC GGACCCGCGC ATCGCCCTCG CCACCTACGC CGAGGGGCGG
GCGCGAGCAC TCACCGACCT CGAGGAGGGA GCCGCCGTAC TCGCCCGGGC GCGGTCACAG
GCGAAGAGCG CTCACGCCAC CTGGATCGCG GCCTCGGCCG GCACGGCGTT AGCGGACACG
CTGCTCACAC TCGGCCGGGT CCCCGAGGCG GCGAAACTCC TCCAGTACGC CGTGGACGAG
TGGCACCGCA TGCGCGCACC ACGTCAGCTG CGCGCGAGCG TGGAGCTCGG AACGCGCTGT
CTCGCCTCGA CCGGCGACCG CGCCACAGCC GAGGCCCTGA CCCACGAACT GATCGGGCGA
AGCGCCCCGA AGGAGCTGGT CGTCGCACGG GCGGCGCGGA CCCTCGTCGC GGCGCTCGCC
GACGTGTTCG GCACCGAACG CATCCACCAC CCACGCCACA CCCCCACCCA CACAGCCGGA
AGGTCAGTCG AACGGCCGAT CCCGGTCGGC TTGCTGTAA
 
Protein sequence
MLVANAGRSV DVETLIDVAW EPHELPSNPF DSLNTRITRL RTLLAPQADV SWCAGGCVLT 
VDAERADAVL FERMVEEAHW CSDREAITVL DRALRLWRGD PLPDLRRNGL EHPEGVRLRQ
LRARAVEDLA VRELRIGAVE DAASRLLALL SAEPLRERAC GYAMWALHRL GMTADAVTCY
DQLVERLEDE LGEGPSTELR QTYRAVTGRE PTPSDRPTDR IPLVGRGHEL ARLSTMLDRE
RMVTVTGPAG CGKTRLVSAA LSTTDVPVTL IPLSTCDDFG LYEKVAAAVG LHSRGPDEGT
DDLPMVLTEY LRGRRHILVF DGCEHLLTSV RALVRRIRAR CPDVTVVATN RVRLGLAGER
VLPLGSLARD GVRDPLLSRA GKLFLDRAHR VRPEFPSTDD EAHLARDLLR RADGLPLTVE
LLAARATGND PALPRPWPSD LVEWSYERLS GSRRELLGAF TVFDGDVDPS AIESVVDTDG
DASDALTELV RTGLLTTVDT ETGTRYRTPD LVRRIVTRRF AGTDSERKIR QRHALWCADL
ITDAVASNDD PSAFDLLCRM EDEVCSALRW AMSEEPGLAA DLSGQIGLLT AYRPRARLLP
WQLRVARDPD PRLAQHAPAT ASGADAALRC GLSEEGLRLA ARAAELATTA QHRCSAVRAL
ICGYHDLGDD DRTAEMCHEL LDSVDVPDSG NADAHAFLAL LAARGGRPRE ALRHAETAAR
YARASGSDPR IALATYAEGR ARALTDLEEG AAVLARARSQ AKSAHATWIA ASAGTALADT
LLTLGRVPEA AKLLQYAVDE WHRMRAPRQL RASVELGTRC LASTGDRATA EALTHELIGR
SAPKELVVAR AARTLVAALA DVFGTERIHH PRHTPTHTAG RSVERPIPVG LL