Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_01160 |
Symbol | |
ID | 8385454 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 121798 |
End bp | 124476 |
Gene Length | 2679 bp |
Protein Length | 892 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644974220 |
Product | predicted ATPase |
Protein accession | YP_003132031 |
Protein GI | 257054199 |
COG category | [R] General function prediction only |
COG ID | [COG3903] Predicted ATPase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGGTCG CGAACGCGGG CCGCAGTGTC GACGTCGAAA CCCTCATCGA CGTGGCGTGG GAGCCGCACG AACTCCCGAG TAACCCGTTC GATTCCCTCA ACACGCGGAT CACCCGACTG CGCACGCTGT TGGCCCCACA GGCCGATGTC AGCTGGTGCG CGGGCGGCTG TGTGCTGACG GTGGACGCCG AGCGCGCCGA TGCCGTCCTT TTCGAACGGA TGGTGGAGGA GGCCCATTGG TGTTCCGACC GGGAAGCGAT CACCGTGTTG GACCGCGCGT TGCGGCTGTG GCGGGGGGAC CCGCTGCCGG ACCTGCGCCG CAACGGGCTC GAACACCCGG AGGGGGTGCG ACTGCGACAG CTTCGGGCCC GGGCCGTGGA GGACCTCGCC GTGCGTGAAT TGAGGATCGG CGCGGTGGAG GACGCGGCGA GTCGGCTGTT GGCTCTGTTG TCGGCCGAGC CGCTGCGGGA ACGCGCCTGC GGTTACGCGA TGTGGGCGCT GCACCGCTTG GGCATGACCG CCGACGCCGT GACGTGCTAC GACCAGCTCG TCGAGCGGTT GGAGGACGAG CTCGGCGAGG GGCCGAGCAC CGAACTGCGA CAGACCTATC GTGCCGTCAC GGGTCGAGAG CCCACGCCGT CGGATCGGCC CACCGACCGC ATACCCCTGG TCGGCCGCGG ACATGAACTG GCTCGGTTGT CCACGATGCT CGACCGTGAA CGGATGGTGA CCGTGACCGG TCCTGCGGGC TGCGGGAAGA CCCGGCTCGT GTCGGCGGCA CTGTCCACCA CGGATGTCCC CGTGACCTTG ATTCCTTTGT CCACATGCGA CGATTTCGGG CTGTACGAGA AAGTGGCCGC CGCGGTGGGT CTGCACTCGC GCGGGCCCGA TGAGGGCACC GACGACCTAC CCATGGTGCT CACCGAATAC CTCCGTGGCC GACGGCACAT CCTGGTGTTC GACGGCTGTG AACACCTGCT CACGTCCGTA CGCGCACTCG TGCGGCGGAT CCGGGCCCGG TGTCCGGATG TCACCGTGGT GGCGACCAAC CGGGTCAGGC TGGGCCTCGC GGGTGAGCGG GTGCTCCCGC TCGGGTCGCT GGCCCGGGAC GGTGTGCGTG ACCCCTTGCT GTCCCGGGCC GGGAAGCTGT TCCTCGACCG CGCCCACCGG GTACGGCCCG AGTTCCCCTC CACCGACGAC GAGGCCCACC TCGCGCGGGA CCTGCTGCGC CGAGCGGACG GCCTGCCGTT GACGGTGGAA CTGTTGGCCG CTCGAGCCAC CGGGAACGAC CCCGCACTTC CGCGACCGTG GCCGTCCGAC CTCGTCGAAT GGTCGTACGA GCGGCTCTCG GGGTCACGAC GGGAGCTGCT CGGCGCGTTC ACGGTGTTCG ACGGCGACGT CGACCCCTCC GCGATCGAGT CCGTAGTGGA CACCGATGGT GACGCAAGCG ACGCTCTCAC CGAACTGGTC CGTACGGGCC TGCTCACGAC CGTCGACACC GAGACCGGCA CCCGCTATCG GACACCCGAC CTGGTGCGTC GCATCGTCAC GCGCCGGTTC GCCGGTACCG ATTCGGAGCG CAAGATCCGG CAGCGACACG CGCTGTGGTG CGCCGATCTG ATCACCGACG CGGTGGCGTC GAACGACGAC CCCTCGGCGT TCGACCTGCT GTGCCGGATG GAGGACGAGG TGTGCTCCGC GCTGCGGTGG GCGATGTCCG AGGAACCCGG TCTCGCGGCC GACCTGAGCG GGCAGATCGG ACTGCTCACG GCGTACCGTC CCCGGGCGCG GCTGCTGCCG TGGCAGCTCA GGGTGGCCCG TGACCCGGAC CCGAGGCTGG CCCAACACGC CCCGGCCACG GCGTCGGGTG CGGACGCCGC CCTCCGTTGC GGCCTGTCCG AGGAGGGCTT ACGCCTCGCG GCCAGGGCCG CCGAACTCGC CACCACCGCG CAACATCGCT GTTCCGCCGT GCGCGCTCTG ATCTGCGGCT ACCACGACCT CGGTGACGAC GACCGCACCG CCGAGATGTG TCACGAGCTG CTCGACTCGG TGGACGTGCC GGACTCCGGC AACGCCGACG CCCACGCCTT CCTGGCTCTG CTCGCGGCCC GTGGCGGCCG CCCTCGGGAG GCGTTACGGC ACGCCGAGAC GGCGGCCCGG TACGCTCGCG CGTCGGGGTC GGACCCGCGC ATCGCCCTCG CCACCTACGC CGAGGGGCGG GCGCGAGCAC TCACCGACCT CGAGGAGGGA GCCGCCGTAC TCGCCCGGGC GCGGTCACAG GCGAAGAGCG CTCACGCCAC CTGGATCGCG GCCTCGGCCG GCACGGCGTT AGCGGACACG CTGCTCACAC TCGGCCGGGT CCCCGAGGCG GCGAAACTCC TCCAGTACGC CGTGGACGAG TGGCACCGCA TGCGCGCACC ACGTCAGCTG CGCGCGAGCG TGGAGCTCGG AACGCGCTGT CTCGCCTCGA CCGGCGACCG CGCCACAGCC GAGGCCCTGA CCCACGAACT GATCGGGCGA AGCGCCCCGA AGGAGCTGGT CGTCGCACGG GCGGCGCGGA CCCTCGTCGC GGCGCTCGCC GACGTGTTCG GCACCGAACG CATCCACCAC CCACGCCACA CCCCCACCCA CACAGCCGGA AGGTCAGTCG AACGGCCGAT CCCGGTCGGC TTGCTGTAA
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Protein sequence | MLVANAGRSV DVETLIDVAW EPHELPSNPF DSLNTRITRL RTLLAPQADV SWCAGGCVLT VDAERADAVL FERMVEEAHW CSDREAITVL DRALRLWRGD PLPDLRRNGL EHPEGVRLRQ LRARAVEDLA VRELRIGAVE DAASRLLALL SAEPLRERAC GYAMWALHRL GMTADAVTCY DQLVERLEDE LGEGPSTELR QTYRAVTGRE PTPSDRPTDR IPLVGRGHEL ARLSTMLDRE RMVTVTGPAG CGKTRLVSAA LSTTDVPVTL IPLSTCDDFG LYEKVAAAVG LHSRGPDEGT DDLPMVLTEY LRGRRHILVF DGCEHLLTSV RALVRRIRAR CPDVTVVATN RVRLGLAGER VLPLGSLARD GVRDPLLSRA GKLFLDRAHR VRPEFPSTDD EAHLARDLLR RADGLPLTVE LLAARATGND PALPRPWPSD LVEWSYERLS GSRRELLGAF TVFDGDVDPS AIESVVDTDG DASDALTELV RTGLLTTVDT ETGTRYRTPD LVRRIVTRRF AGTDSERKIR QRHALWCADL ITDAVASNDD PSAFDLLCRM EDEVCSALRW AMSEEPGLAA DLSGQIGLLT AYRPRARLLP WQLRVARDPD PRLAQHAPAT ASGADAALRC GLSEEGLRLA ARAAELATTA QHRCSAVRAL ICGYHDLGDD DRTAEMCHEL LDSVDVPDSG NADAHAFLAL LAARGGRPRE ALRHAETAAR YARASGSDPR IALATYAEGR ARALTDLEEG AAVLARARSQ AKSAHATWIA ASAGTALADT LLTLGRVPEA AKLLQYAVDE WHRMRAPRQL RASVELGTRC LASTGDRATA EALTHELIGR SAPKELVVAR AARTLVAALA DVFGTERIHH PRHTPTHTAG RSVERPIPVG LL
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