| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_01130 |
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| Symbol | |
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| ID | 8385451 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 116121 |
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| End bp | 117338 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644974217 |
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| Product | glycine betaine/L-proline transport ATP binding subunit |
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| Protein accession | YP_003132028 |
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| Protein GI | 257054196 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4175] ABC-type proline/glycine betaine transport system, ATPase component |
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| TIGRFAM ID | [TIGR01186] glycine betaine/L-proline transport ATP binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCCCGTTG TCCGCACTGA GAATTTGTAC AAAGTATTCG GCCGGCGCGC ACGTGATGCG
GTCAATATGC TCAAAAACGG CGCCGATCCG TCTGATTTGG ACATACCTGG GGTGACCGCC
GCCGTCATCG ACGCCTCATT CGAAGTCGGT GAAGGCGAGA TCTTCGTGGT GATGGGACTC
TCCGGTTCCG GGAAATCCAC GCTGATCCGT ATGTTGAACG GCATTCTCCC GGCAACCTCC
GGCCAGGTGT ACGTGAACGG CGAGGACATC ACCACGATGT CGCCGAAACA GATCCGGGAC
ATGCGCCAGC GCACGATGAG CATGGTGTTC CAACACTTCG CTCTCTTCCC GCATCGCACC
GTGCTGGACA ACGCCGCCTA CGGTCTACGT GTCAAAGGCG TCGAGAAGGC TGAACGCCTC
AACAAGGCGC GGGAAGCACT GGAACTGGTC GGACTGGCCG GCTGGGAGGA CCATCTTCCC
GAACAGCTCT CCGGCGGAAT GCGGCAGCGT GTGGGGCTCG CGCGCGCCTT GGCCGCGGAC
ACCGACATCC TGCTGATGGA CGAGGCGTTC AGCGCGCTGG ACCCGCTGAT CCGCAGGGAG
ATGCAGGACC AACTGCTGTC CCTGCAGTCA CAACTGGGCA AGACGATCAT CTTCATCACC
CACGACCTCA ACGAGGCGAT GCGCCTCGGC GATCGGATCG CGGTGATGCG CCACGGCCGG
ATCGCACAGA TCGGCACGGC CGAGGAGATC CTGACCAACC CGGCAGACGA GTACGTGGCC
CAGTTCGTGC AGGACGTGGA CCGGACCCGG GTGCTCACCG CGAAGTCGGT CATGGACAGG
CCCGTGACCA CGATCGGCGT CGGTTCCGGA CCGCGTGCGG CGTTGCGCAC CATGCGGGAG
CATCAACACT CGGCCCTGTT CGTGGTGGCA CGCGACGGCC GGCTCGCCGG CGTCGTCACC
GACTCGGCCG CCGCGGAGGC GGCGAAGCGG GGCGTGAACA CCGTGCAGGA GATCGTCAGC
GACGAATTCT CCTTCGTCGC ACCGGAAACC CCGGTGAGCG AACTGTTCAC CCCCTCCGCC
GAAAGCCCCG TCCCGCTGGC GGTCGTCGAC TCGGACCAGC GTCTACTCGG CGTGATCCCC
AGGGCCACGC TGCTCGCCGC GCTCGGCGAG GTCACCTCTT CGACCGACGT GAAACCGGGG
GTGGCCAGCG ATGCGTGA
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| Protein sequence | MPVVRTENLY KVFGRRARDA VNMLKNGADP SDLDIPGVTA AVIDASFEVG EGEIFVVMGL
SGSGKSTLIR MLNGILPATS GQVYVNGEDI TTMSPKQIRD MRQRTMSMVF QHFALFPHRT
VLDNAAYGLR VKGVEKAERL NKAREALELV GLAGWEDHLP EQLSGGMRQR VGLARALAAD
TDILLMDEAF SALDPLIRRE MQDQLLSLQS QLGKTIIFIT HDLNEAMRLG DRIAVMRHGR
IAQIGTAEEI LTNPADEYVA QFVQDVDRTR VLTAKSVMDR PVTTIGVGSG PRAALRTMRE
HQHSALFVVA RDGRLAGVVT DSAAAEAAKR GVNTVQEIVS DEFSFVAPET PVSELFTPSA
ESPVPLAVVD SDQRLLGVIP RATLLAALGE VTSSTDVKPG VASDA
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