| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_01050 |
|---|
| Symbol | |
|---|
| ID | 8385443 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | - |
|---|
| Start bp | 105316 |
|---|
| End bp | 105915 |
|---|
| Gene Length | 600 bp |
|---|
| Protein Length | 199 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 644974209 |
|---|
| Product | predicted membrane protein |
|---|
| Protein accession | YP_003132020 |
|---|
| Protein GI | 257054188 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2119] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.0797828 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGCCG CTCTTCTGGC TTTTGTGACG ACGTTCGCGT TGGTGACGGC CGTCGAACTC
CCCGATAAGA CATTTGTCGC GACACTGGTG CTCACCACGC GTTTTCGGCA TGACGCGGTT
CTCGTCGGCG CAGTGGCCGC GTTCGTCGGA CAGGCACTCA TCGCCGTCGG ATTCGGCAGC
GCACTGACAT TCCTGCCCGA TCAGCTGGTG TCCGTGATCG TCGGAGCGCT GTTCGGTCTC
GGTGCCGCCA TGCTGCTGCG TGAGGGTTTC CGAACCGGTG AGGACTCCGC ACACGACGCG
GCACGAGGGG GAGCCCCCGC CACATTCCGG CGCGCGAGCC TGACCTCGTT CGGAGTGTTG
TTCGCGGCGG AATGGGGCGA TGCCTCACAA CTCGCCACAG CGGGCCTGGT GGCGCGTTCG
GCGCAGCCCT TCGCCGTGGG TCTCGGCGCA CTCACCGCGC TCATCACCGT CGCGACGGTC
GCGGTGCTGC TCGGCCGCAA GATCCGTTCC CGGCTGCGAC CCCGACTGCT GCAACGCGTG
GCCGGATTCG TCTTCGCCGG GCTCTCCGCC CTGGCCTTCG GCAACGCGCT CCTCGGCTGA
|
|---|
| Protein sequence | MSAALLAFVT TFALVTAVEL PDKTFVATLV LTTRFRHDAV LVGAVAAFVG QALIAVGFGS
ALTFLPDQLV SVIVGALFGL GAAMLLREGF RTGEDSAHDA ARGGAPATFR RASLTSFGVL
FAAEWGDASQ LATAGLVARS AQPFAVGLGA LTALITVATV AVLLGRKIRS RLRPRLLQRV
AGFVFAGLSA LAFGNALLG
|
|---|
| |