Gene Svir_00960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_00960 
Symbol 
ID8385434 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp96775 
End bp97611 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content69% 
IMG OID644974200 
Producthypothetical protein 
Protein accessionYP_003132011 
Protein GI257054179 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCCT CCGGCCGTGA CGTGGACGAC GACGAGCTCG ACGCCCGGCT GCGGGCGTTG 
TTCGCCGATC CTCGGCTGGA CGTGGCCTCT CTTCCCCGCA CGGAGGAGAT CGTCGCGGGG
GCGCGGCGGC TTCGCCGACG TCGGGCCATG CTCACCGGTG GTGGCGGTGC GCTCGTCGCG
GTGGCGGTCG CGATGGTGGG TCTCATGGTG TTGGGCCCCC GTCTCACCGG TGGTGGTGAC
GGCGAGCCCG TCGCCGTCTC GCCCGCCGAA CAGGAGGCGG AGTCGGAGGC GATGCTCACC
GCGCCTCCGC GGAGCCTCCA CACGAATCCA CAGAGCCTGC CCGAGCTGCC GGACCCTAAG
GTGACCGACC CGAACTCGAC CATGTCGTCG CTCGAGACGT CCCCGGAGGC CTCCACACCT
CCGGAATCGG GGTCCGTGAC GATGACCCAG GCCGTGCTCG ATGCCACCGG CTACAAGAGG
TTGGAGCTGG GCATGCCGTT CCAGGAGGCC GTGAAGACGG AGCTGCTCAT GGTCGCGGAC
GGTCCTCCGC CGCCGGAGAA GTGCGTCGAC TACCCGCTCG TGGAAGGCGA CGCGGTGGTG
AAGAACGTGA CCGTCTCCGC GGAGCACGGG GTGGTGGCGT TCACGGCCGT GAACGCGGTG
ACCCCCGACG GAGTCGGTGT CGGAAGCCCG GTCGCTGACG TGGAGGAGCG GTACCCCTCG
GGGGAGGGCG ATGAAAGGGC TTTCAACGTC GACGTGGGCA CGGGTAGATA CGAGTTCACC
ATCTCCAACG GGACGGTCAG TGAACTCCGG CTGGTGGCGC ACACGTACGA CTGCTGA
 
Protein sequence
MSASGRDVDD DELDARLRAL FADPRLDVAS LPRTEEIVAG ARRLRRRRAM LTGGGGALVA 
VAVAMVGLMV LGPRLTGGGD GEPVAVSPAE QEAESEAMLT APPRSLHTNP QSLPELPDPK
VTDPNSTMSS LETSPEASTP PESGSVTMTQ AVLDATGYKR LELGMPFQEA VKTELLMVAD
GPPPPEKCVD YPLVEGDAVV KNVTVSAEHG VVAFTAVNAV TPDGVGVGSP VADVEERYPS
GEGDERAFNV DVGTGRYEFT ISNGTVSELR LVAHTYDC