| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_00860 |
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| Symbol | |
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| ID | 8385424 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 88782 |
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| End bp | 89684 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644974190 |
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| Product | ClpP class periplasmic serine protease |
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| Protein accession | YP_003132001 |
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| Protein GI | 257054169 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCCCAGG CCGGTCTCGC GGTGGGTTTC GAGCGGGATC ACCGCAAGTA CGCTGGCTCC
ATGAGTCGTA AGGACACCCT GGTTTCCCGC CTTCCGGTGC TCGGTGACCG AGCAGAGCGT
AAGGACGTCG TCTCCGTCGT CAAGCTGCAC GGTGTGATCA CGCCGCAGGC ATCCCCGCTG
GCCGCTCGTG GCGTCATCAA CCTGGCCTCG GTGGAGTCGG CGCTGAAGCG GGCCTTCGGT
CATGAGCGGT TGAAGGCCGT GGCATTGCAG ATCAACTCGC CCGGTGGCGC GCCGACACAG
TCGGGACTCG TGGCCGAACG CATCCGGCAA CTGGCCGACG ACAAAGGTGT TCCGGTGATC
GCGTTCGCCG AGGACGTGGC GGCCTCCGGC GGCTACTGGT TGGCGTGCGC GGCCGACGAG
ATCTACGCGC ACCGCACGTC TTTGGTGGGG TCCATCGGCG TCGTCACGAA CTCGTTCGGT
TTCGCGCGTC TGCTCGAACG TTTCGGCATC GAGCGCAGGC TCTACACCTC GGGGGAGGCC
AAATCCCGAC TCGACCCGTT CAGCCCCGAA AAACCCGAGG ACGTGGAGTG GCTGAACAAG
CTGCACACCC AGTTGCACGA CCTGTTCGTG GAGTGGGTGA AGCAGCGGCG CGGATCGCGG
CTGGCCGAGT CGGAGGAGCT GTTCAACGGG GATGTGTGGC TTGGCCCGAA GGCCCTTGAA
CTGGGGCTCG TCGACGGTCT CGGCAACCTT CGGGACATCG TGAAACAGCG GTACCCCGAG
GCGGAGATCG TGGTGGCTGA GCCGAAGAAG CCGCTGCTGG CGAAGTTGGG TGTCGGCTCC
CCGGCGGCCG CTGTGTTGGA CGCGGTACAC CACCGTTCGC TATGGTCCCG CTTCGGACTG
TGA
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| Protein sequence | MSQAGLAVGF ERDHRKYAGS MSRKDTLVSR LPVLGDRAER KDVVSVVKLH GVITPQASPL
AARGVINLAS VESALKRAFG HERLKAVALQ INSPGGAPTQ SGLVAERIRQ LADDKGVPVI
AFAEDVAASG GYWLACAADE IYAHRTSLVG SIGVVTNSFG FARLLERFGI ERRLYTSGEA
KSRLDPFSPE KPEDVEWLNK LHTQLHDLFV EWVKQRRGSR LAESEELFNG DVWLGPKALE
LGLVDGLGNL RDIVKQRYPE AEIVVAEPKK PLLAKLGVGS PAAAVLDAVH HRSLWSRFGL
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