Gene Svir_00790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_00790 
Symbol 
ID8385417 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp82409 
End bp82987 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content66% 
IMG OID644974183 
Producthypothetical protein 
Protein accessionYP_003131995 
Protein GI257054163 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.293947 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTCGTGG CGCTCGGTGC CGTGATCGGT GGCGCGTGGT GGCTGGGCCA GGACTCCTCG 
GACCCGGCCC CCGTGTCCAC CACGCCGTCC GGGGAGGTCA CACCCACGGA CTCGGAGGTC
GCGCTGGCGG ACAAGCTGCC CACCTTGCCC GGTGAGCAGA GTCCGAACAA CTCCACGATG
TCGGTCGACC GTGGCGCGGA ACTCGGGCTC TATCCCGAGC AGACGGCCAA CTTCTTCACC
GAACACGGCG TCACCGAGGT GATCGTCCGC GGTTCACTGG ACGGTTCGAC CGGTTATCTG
CTCCTGGTGT TGCGCACCGG TGAACCGGCA CAGGCGCAGC ACGTGGCAGA GCACCTGTAC
CAGGTCACGC TGCCCGAGAA ATCCACCGAG AGCGAGGGCC CACCCCGCAT AGCGAGCGGC
TTTTTCGAAC AGAAGTGGGT GCACGGTGCC TGGTACGCCT CGAACGAGTA CGCGGTGGCG
TTGGTGGTCA CGGAGCCGTC CAACGGCGAG CCCGGCACAC TCTCGGAAAA GTTACAACGC
ATAGTGGAAC CGCTACAGGA AGTCCTACCC GCGCACTGA
 
Protein sequence
MLVALGAVIG GAWWLGQDSS DPAPVSTTPS GEVTPTDSEV ALADKLPTLP GEQSPNNSTM 
SVDRGAELGL YPEQTANFFT EHGVTEVIVR GSLDGSTGYL LLVLRTGEPA QAQHVAEHLY
QVTLPEKSTE SEGPPRIASG FFEQKWVHGA WYASNEYAVA LVVTEPSNGE PGTLSEKLQR
IVEPLQEVLP AH