| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_00660 |
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| Symbol | |
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| ID | 8385404 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 64649 |
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| End bp | 65608 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644974170 |
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| Product | periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) |
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| Protein accession | YP_003131982 |
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| Protein GI | 257054150 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1732] Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.906565 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGTGGTG CGTGTGCTCT GTTGGCCGCT CTGTCGTTGT TGGTGAGCGC ATGTGGACTC
AACGTCAACG CCGCCTTGCC GTTCGATGTG GAGTCGGGGT CGATCCGGAA GGTGCCGCAG
TTGGAGGGCG TGGAGATCAC GGTGGGGTCC AAGGACTTCA CCGAGAACGT GCTGCTCGCC
TACATCGCGC AGATCGCCCT GAAGGCCGCC GGCGCCGAGC CCATCGACTT CACCAACATC
TCCGGTTCGA ACAGTGCCCG GTACGCGTTG GAGAAAGGTC AGATCGACCT GATGTGGGAG
TACACGGGCA CGGGGTGGTT GTCCCATCTG GGCAACGACC AACCCATACC GTCCGAAGAG
GAGCAGTACG AGGCGGTACG AAAGGCCGAC CTGGAGCAGA ACGGGATCGT CTGGCTGCCG
TACTCGGAGG TCAACAACAC CTACGGGTTC GCCACCACCG AGGCCTTCGC CGAGAAGCAC
GACCTGCACA CGCTGAGCGA CCTGACGGAC TTCCTCAAGG AGAATCCGCA GGAGGCGGTG
TTCTGCGTCG ACACGGAGTT CGCCAACCGG CCCGACGGGA TGCCCGGGGT GCAGGAGACG
TACGGCTTCC CGACCACCAC GACGAAGACG TTCGGTCTGG GCGCGATCTA CGCCGCTGTG
GCGAACAACA CTTGCAACGT CGGTGAGGTG TTCATCACCG ACGGTCGGAT CGCAGGGTTG
AACCTCCGCG TGATGGAGGA CGACAAGCGG TTCTTCCCGC AGTACAACGC CGCCATCACC
ATGCGTCAGG ACTTCTACGA GCGGTATCCC CTGATCGCCG AGGTGCTGGT GCCGGTCGCG
GAGGCGTTGA CCATCGACAC GATGATCGAG TTGAACAAGC AGGTGGACGT CGACGGCAGG
GACGCGGCCA GGGTCGCGCG GGACTGGATG GCCGAACAGG GCTTCATCAA GGCCGACTGA
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| Protein sequence | MRGACALLAA LSLLVSACGL NVNAALPFDV ESGSIRKVPQ LEGVEITVGS KDFTENVLLA
YIAQIALKAA GAEPIDFTNI SGSNSARYAL EKGQIDLMWE YTGTGWLSHL GNDQPIPSEE
EQYEAVRKAD LEQNGIVWLP YSEVNNTYGF ATTEAFAEKH DLHTLSDLTD FLKENPQEAV
FCVDTEFANR PDGMPGVQET YGFPTTTTKT FGLGAIYAAV ANNTCNVGEV FITDGRIAGL
NLRVMEDDKR FFPQYNAAIT MRQDFYERYP LIAEVLVPVA EALTIDTMIE LNKQVDVDGR
DAARVARDWM AEQGFIKAD
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