Gene Svir_00540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_00540 
Symbol 
ID8385392 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp53446 
End bp53850 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content68% 
IMG OID644974158 
Producthypothetical protein 
Protein accessionYP_003131970 
Protein GI257054138 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.530239 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATCAGA TTCTCGGGCA AGTTCTCCGC AACGCCGTGT GGGAACGCCT CGACAGACTC 
ACCGACGTCG CGAACGACGC GGACGCACCA GCGCTGATCT CCGTGGCCCG TTCCGAGCTG
CCCCGGTTGG CGGAGGGCTG GCGCGCCATT CTGCGAGTGC ACGAGCCCGA CGAGCGTGGC
GACTGTCCGA CGTGTTCGAC ACGGTGGCAC AAGTGCAAGG CCCCGTGTTC GGTGTGGCAG
GTCGCCCACG ATCACCTCGT GGCGGGCGGC TTGGCCCATT TCCAGCATTC ACGGCGCTAT
CGGCGTCGCC GTGCGGAATC CACCCCCGAC GAGACGAACA CGTCGACGAC ACCTGCCACG
CGGCCGACCG GCCGGCATGC CCTCATAGGA AGGCCGCACC GATGA
 
Protein sequence
MDQILGQVLR NAVWERLDRL TDVANDADAP ALISVARSEL PRLAEGWRAI LRVHEPDERG 
DCPTCSTRWH KCKAPCSVWQ VAHDHLVAGG LAHFQHSRRY RRRRAESTPD ETNTSTTPAT
RPTGRHALIG RPHR