Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_00530 |
Symbol | |
ID | 8385391 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 52380 |
End bp | 53018 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644974157 |
Product | transcriptional regulator |
Protein accession | YP_003131969 |
Protein GI | 257054137 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCCGACA AGCACATCGC GACGCAGGCC GAATCAACCC CACTCCGTCG ACAGCCGGTC CAGCAGCGCA GCGCCAAGCG GGTCGAGCGA ATGCTGGACG CGAGCGCCGA ACTGCTTGAG GAGGTGGGCT ACGAAGGACT CACGACCACG CTCATCGCCA AACGGGCCGG CGTGGCGGTG GGCTCGTTGT ACCAATTCTT CCCCGACAAA CGAGCCGTCG TGCAGGCGCT GGCCCAGCGG AATCTGGAAC ACTTCATCGC CGAGGTCCAC AAACGCCTCG GGACAGTGGA CACACGCCAC TGGTGGGACG TCGTCGACTC CTTGTTGGAC ATCTACCTGA CGATGCACCG TGAGGTCCCG GGGTTTTCCA CGGTGCATTT CGGTGACCCC GTCGAACCGC GCTTGCTCGA CGACCGACGC ACCAACAACC GGGTCATCGT CGACGCTCTC ACCAGATTGG TCACCGATCA CGTCAACCTT CCGCCGGAGC AGGTCACACT CCCGATCACG ATCGCCGTGG AAGCCGCGGA CGGCTTGCTC AACTACGCCT TCCAGGTCGA TCCCCAAGGC GATCCGGAGG TCATCGCCGA AACCAAAACG CTGATCAAGG ACTACCTGGC GGGCAAGTTC GGGGACTGA
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Protein sequence | MSDKHIATQA ESTPLRRQPV QQRSAKRVER MLDASAELLE EVGYEGLTTT LIAKRAGVAV GSLYQFFPDK RAVVQALAQR NLEHFIAEVH KRLGTVDTRH WWDVVDSLLD IYLTMHREVP GFSTVHFGDP VEPRLLDDRR TNNRVIVDAL TRLVTDHVNL PPEQVTLPIT IAVEAADGLL NYAFQVDPQG DPEVIAETKT LIKDYLAGKF GD
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