Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_00470 |
Symbol | |
ID | 8385385 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 46116 |
End bp | 47111 |
Gene Length | 996 bp |
Protein Length | 331 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644974151 |
Product | flavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase |
Protein accession | YP_003131963 |
Protein GI | 257054131 |
COG category | [C] Energy production and conversion |
COG ID | [COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases |
TIGRFAM ID | [TIGR03558] luciferase family oxidoreductase, group 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.402107 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.593742 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACCC GAAGCCTGTC CGTGCCGCTG TCGGTCCTGG ACCGGTCGAG CATCCGGCGG GGACAGGCAC CGGCGGACGC CGTACGCGAC ACCGTGCGAT TCGCCCGTCG GATGGAGGCG CTGGGTTACC ACCGGTTCTG GGTCGCGGAG CACCACAGCG TCCCCGGTGT GGCGGGCTCC GCCCCCACGG TGCTGGCCGC GGCGGTCGCC GCGAACACAT CCTGCATCCG TGTCGGCACC GGTGGGGTCA TGCTGCCGAA TCACCAACCG CTCGTGGTCG CCGAGCAATT CGGCACGCTG GAAGCACTCC ACCCCGGCCG TATCGACATG GGGTTGGGCC GTTCGGTGGG CTTCACCGGC GGGGTCAGGG CGGCCCTCGG TAGAGGCAAG GAACACGCCT CCCACTTCGA CGAGCAGATC CGGGAGCTCC TCGGCTACTT CGCCGGTTCC CCGGTCCATC GCGGAGTGCG CGGTATCCCG GCCGAGGGAC TGCGCGTCCC GGCGTTCGTC CTCGCCACGG GCTCCGGGGC GGACGTCGCC GCCGACACGG GCCTGGCACT CGTCATCGCC CCGGTGTCGG GAGTCGACAA GATGAGCGAA CACATCGCCC GCTATCGCGC CACGTTCCGA CCGTCCTCGC TGTGGCCGCG ACCGTACGTG ATCGTCGCGA CGGCCGTGGC GGTCGCCGAC ACGCCCCGGC GGGCTCGGGA GTTGCTGCTG CCGGAGGCGT GGTCACTGGT GCACTCCCGC ACTCGCGGCG TGTTCCCACC GTTGCTGCCG CCCGCCGACA TCCCCACACC GACCGAACGC GAGGCGGCCC TGCTCGCCGA CGTGCTGCGG AACCAGATCC ACGGCACCCC CGCATCGGTG CACGACGAAC TGGTCGCGCT CGTGGAACGT ACGGCGGCCG ACGAATTGCT GATCACGATG AGCACCTACG ACCGGGCAGA CATGCTCGAC TCGTACACCG CGCTGGCCGA GCTGGCCGGC GGCTGA
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Protein sequence | MSTRSLSVPL SVLDRSSIRR GQAPADAVRD TVRFARRMEA LGYHRFWVAE HHSVPGVAGS APTVLAAAVA ANTSCIRVGT GGVMLPNHQP LVVAEQFGTL EALHPGRIDM GLGRSVGFTG GVRAALGRGK EHASHFDEQI RELLGYFAGS PVHRGVRGIP AEGLRVPAFV LATGSGADVA ADTGLALVIA PVSGVDKMSE HIARYRATFR PSSLWPRPYV IVATAVAVAD TPRRARELLL PEAWSLVHSR TRGVFPPLLP PADIPTPTER EAALLADVLR NQIHGTPASV HDELVALVER TAADELLITM STYDRADMLD SYTALAELAG G
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