| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_00460 |
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| Symbol | |
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| ID | 8385384 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 43136 |
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| End bp | 45901 |
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| Gene Length | 2766 bp |
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| Protein Length | 921 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644974150 |
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| Product | DNA-binding transcriptional activator of the SARP family |
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| Protein accession | YP_003131962 |
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| Protein GI | 257054130 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3629] DNA-binding transcriptional activator of the SARP family |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.622636 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGTTCC GCATCCTGGG CCCGTTACAG GTCGTGGATG GCGACCGGGA GGTCGTTGTG
CCCGCGGGCA GGCTTCGCGT GTTGTTGGCG GCTCTGGTGT GCAATGCCAA CCGCGTGGTG
TCCGTTTCGG AATTGATCTC ATACCTGTGG GACGACCCGA GCGCGAGCGC ACGGAACACC
GTGCGTTCCT ACGTGCGCAG GTTGCGGGCC CGCCTTCGGG AAATCGATTC CCAGCGCGTG
TTCATCCGAC AACGGACACC CGGCTACGTT CTCGACGTCG ACGACACTGA GGTGGATCTG
CTGCGATTCC GGTCGATCGT GTCGGAGGCG TACGGAACCG CTGATCCCCG GAAAGCCGCG
GAACTGTTTC GGTCGGCATT GAAGCTGTGG CGGGGAAAGC CGCTGGCCGA CATCGAGTCG
GAAGCGCTCC GGCGTGACGT CGCCGCACCG TTGAGCGAGG AACACACCAG GACGGTCGAG
GCGAGGATCG ACCGGGAACT GGCGTCCGGG GCGCACACCG AGTTGGTGAG TGAGCTCACC
GCGTTGGTCG AGCGGCATCC GCTCCGGGAG CGGTTCTGGG GGCAGCTGAT GTCGGCCCTG
GCACACGGTG GTCGTCAAGC CGATGCGCTC GCGGCTTACC AGCGGTTGCG CACGACGCTG
GCGGAGGAGC TGGGCATCGA GCCCGGTCCG GAGCTCAGAC GCATCCACGA GATGGTTCTG
AACGGAAAGA TCCCCGATCC GCGACGGGAC CACGAGGAGG ACGGTGCCCC ACCCGGGCCG
GTCGGCGGTG GGACCCTCGG GGGGATTCCC GCCGCGCCGC CGTCGCCGCG GCAACTCATC
GCCGACACCA CGTCGTTCGT CGGACGGGAA CGACTGATCG ACGACCTGAC CCGGTGGTTG
GCGAATCCGT CGGCTCGACG ACTGCTCGTC GTGAGCGGAC AGCCGGGCGT GGGTAAGACG
GCTCTCGCCG TGCGGCTTGC GCACCGCGTC GCCGAACACT TCCCCGACGG GCAGTTGTTC
GTCGACCTGC ACGGTTTCTC CTCCACCCCG GCGATCGCCC CCGCCGATGT GCTGCTCCGA
TTCCTTCGTG CGCTGGGGCA TCCGGCGGAG CTGATCCCCG AGGACCTGGA CGAACGCACG
GCCCTGTTGC GGTCCGTGCT CGCCGAAAGG CGGGTGTTGC TCGTCCTGGA CAACGCCGCG
ACCGCCGACC AGGTTCGGCC GTTGTTGCCG GGCACGACCG AGTGCGCGGT GATCGTCACC
AGTCGGAACG TCCTGTCGGG TCTTGTCGCC GTGGACGGGG CCCGTGGGGT GCGCGTGGGA
GCACTGACCA CGGACGAGTC GACCTCACTG CTGTCCACCC TCCTGGAGGG GCGTGGTGAC
GTACGTGACG AGGACCTGCG GCGATTGGCC GACGCGTGCG GTGGCATCCC CCTGGCGTTG
CGGATCGCGG CCGCACACCT CGTGACCCGG AACGAGGTGA CGGTGTCCGA TCTCCTCGAG
GACCTGTCCC GGTACCGCCT GGACGTGCTC ACGGTCCCGC ACGACGGCCA CGCCTGCGTG
CGCACGGCGA TCGACGTGTC CTACGCGGCG TTGTCCGAGC CGGTCGCCCG GTTGCTGTTG
TCGCTCAGCC TGCTGCCCAC ACCCGAGTTC TCCGTTCCGG TCGCGGCGGC GGTGGGGGAC
TGCGATCTCC CCGAGGCGAT GCGGCTCGTG GCGGCGTTGG CGGAGGCCAA TCTGGTCGAG
GAGAGGGGCG CGGGTCGTCA CCGGCTCCAC GACCTGGTGT GGGTCTACCT CGCCCACCGG
GCCGGACAGG AGCTGTCGGC GGAGGAGCGG TTCGCCGCGG CCCGGCGGAT GGCGGACTTC
TACCTGCACA CCGTCATCAG CGCGGGATGG TTCGTCCGGA GGGAACCGTT GCCGATCGAG
TTACCGACCC GGCCGGACAC GATACGGACG GTCCCGTTCG ACAACCTCCA GCAGGCGGTG
GCCTGGTACG AGGCCGAGCG AGCGAACCTC GTCGCCGTGA TCCGGGAGTG CGAACGACGG
GGCTGGCACC GGCACGCCTA CGTGCTGCCC ATCGTCCTGT GCTCCTTCTA CCTGTTGCGC
AAGCATTGGT CTGATTGGGA GGAGACCCAC ACGGTGGCGT TGCGGGCGGC GCGCCGCGGC
AACGACCGTC GGGCCGAATC GGCGGTGCTG CACCGACTGG GCGCGTTGTT CGACAACCAG
GGACGGTCCC GGAAGGCGTT GGACACGTAC CGGGCCGCTA TCGACATCGC CAGGGAATTG
GACGATCCAC GGTTGGAGGC GGCGGCGTTG ACGGGTGCCG GGGCGGCTTA CTTCTCCGTC
GGCCGGTTCT TCGACGCCCA CAGCTGCTAT CAGCGTGCCG TGGAACTGCA CCTCAAGGCG
GGGAACCCGT ACGGGCAGGT GGGCCCGCTT GTCAACGTCA CGAGACTGCA CGTGGCTCGT
CGGGACTTCG CCGCGGCCTT CGCGAGTGCT CGGGAAGCGA TCAAGACGGC CATGGCGTAC
GGCTCGGTGA ACCATCCCGG CATCGCCTGG TTGAACCTCG GCGAGGCCTA CCTCGAGGCC
GGCTATGTGG ACGAGGCCGT CGAGGCGATC GAACAAGCCG GCCGCGTGGC CACGATGAGC
AGTGATCGCG ACACCAAGGC TCGGAGTCTG AACCTCCTCG CCGCGGCCGA GGAGCGGCGG
GGAGACATGC TCGCCGCGCG CCGGTTCCGG CAGCGGGCGA CGTTGTACGC TGCGGAGATC
GGTTGA
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| Protein sequence | MEFRILGPLQ VVDGDREVVV PAGRLRVLLA ALVCNANRVV SVSELISYLW DDPSASARNT
VRSYVRRLRA RLREIDSQRV FIRQRTPGYV LDVDDTEVDL LRFRSIVSEA YGTADPRKAA
ELFRSALKLW RGKPLADIES EALRRDVAAP LSEEHTRTVE ARIDRELASG AHTELVSELT
ALVERHPLRE RFWGQLMSAL AHGGRQADAL AAYQRLRTTL AEELGIEPGP ELRRIHEMVL
NGKIPDPRRD HEEDGAPPGP VGGGTLGGIP AAPPSPRQLI ADTTSFVGRE RLIDDLTRWL
ANPSARRLLV VSGQPGVGKT ALAVRLAHRV AEHFPDGQLF VDLHGFSSTP AIAPADVLLR
FLRALGHPAE LIPEDLDERT ALLRSVLAER RVLLVLDNAA TADQVRPLLP GTTECAVIVT
SRNVLSGLVA VDGARGVRVG ALTTDESTSL LSTLLEGRGD VRDEDLRRLA DACGGIPLAL
RIAAAHLVTR NEVTVSDLLE DLSRYRLDVL TVPHDGHACV RTAIDVSYAA LSEPVARLLL
SLSLLPTPEF SVPVAAAVGD CDLPEAMRLV AALAEANLVE ERGAGRHRLH DLVWVYLAHR
AGQELSAEER FAAARRMADF YLHTVISAGW FVRREPLPIE LPTRPDTIRT VPFDNLQQAV
AWYEAERANL VAVIRECERR GWHRHAYVLP IVLCSFYLLR KHWSDWEETH TVALRAARRG
NDRRAESAVL HRLGALFDNQ GRSRKALDTY RAAIDIAREL DDPRLEAAAL TGAGAAYFSV
GRFFDAHSCY QRAVELHLKA GNPYGQVGPL VNVTRLHVAR RDFAAAFASA REAIKTAMAY
GSVNHPGIAW LNLGEAYLEA GYVDEAVEAI EQAGRVATMS SDRDTKARSL NLLAAAEERR
GDMLAARRFR QRATLYAAEI G
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