Gene Svir_00410 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_00410 
Symbol 
ID8385379 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp38283 
End bp38753 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content65% 
IMG OID644974145 
ProductFHA domain-containing protein 
Protein accessionYP_003131958 
Protein GI257054126 
COG category[T] Signal transduction mechanisms 
COG ID[COG1716] FOG: FHA domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.649805 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCAGAGC TGGTCGTACA ACTCACCAGA GTGGGATTCC TCGTCCTGCT CTGGTTGTTC 
GTGTTCGCCG CGCTGCGCGT GGTGCGCTCG GACCTTTACG CGGCGTCGGG GCTGAGGGTG
AACCTGCCCA GCCTCCGCCG TGGTGACAAG GAGAGGAAAC CGTTACGGGG CAGGAACAAA
CTGCCCCGTC AACTCGTGGT GACCCACGGA GCGCTCGCCG GCACCCGGAT CGCCCTGGAC
GGCAGGCCGA TCCTCATCGG GCGGGCCGAC GACTCGACTC TGGTGCTCGA CGATGACTAC
GCCTCGACAC GGCATGCCCG CCTGTCGTTG CGAGGCGACG AGTGGTTTGT GGAAGATCTG
GGCTCGACCA ACGGCACCTA CCTGGACCGG GCTAAGGTCA CTGCACCCAT GAAAGTTCCA
CTCGGCGTCC CCATCCGGAT AGGCAAGACG GTGATCGAGC TTCGCCCATG A
 
Protein sequence
MPELVVQLTR VGFLVLLWLF VFAALRVVRS DLYAASGLRV NLPSLRRGDK ERKPLRGRNK 
LPRQLVVTHG ALAGTRIALD GRPILIGRAD DSTLVLDDDY ASTRHARLSL RGDEWFVEDL
GSTNGTYLDR AKVTAPMKVP LGVPIRIGKT VIELRP