| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_00390 |
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| Symbol | |
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| ID | 8385377 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 35219 |
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| End bp | 36850 |
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| Gene Length | 1632 bp |
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| Protein Length | 543 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644974143 |
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| Product | cell elongation-specific peptidoglycan biosynthesis regulator RodA |
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| Protein accession | YP_003131956 |
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| Protein GI | 257054124 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
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| COG ID | [COG0772] Bacterial cell division membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.476273 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTCAGC CCGCAGCTAA CCCTGGTGCG GCAGCTCAGT ACACAACGAA TCCGCCACGT
GAGTTGCCGA AGCGGCGGGG CACCGAACTC GCCTTGCTCG CGTTCTCCGC TCTCATCGTG
ACGTTGGCGT TCGTCCTGGT GCAGGCCAAC CAGGAGCAGG AGCTGTCGTG GTCGGTGGTC
TGGTACGGGC TGGCCTACCT CGCGATCTTC GGTGTCGCAC ACCTGGCCGT CCGACGGTGG
GCACCGTATG CGGATCCGCT GATCCTGCCG TGTGTGGCGT TGCTCAACGG GCTGGGTCTT
GTGATGATTC ACAGAATCGA CCTGGCCGAG GCCCAACGTG CTCTCGCCAA CGGTGGGGAC
GCAGCGGCCT ACGCGCCTCG GCAGGTGCTG TTCACGGTCA TCGCGCTGGC CTTCTTCCTG
GGTGTGCTGA TCCTCGTCGC GGATCACCGT AAGCTCACCC GCTACGCCTA CACGTGCGGT
CTGACGGGCT TGGTGGCCTT GGCGTTGCCC GCCGTGCTGC CGAGTTCGTT GTCCGAGGTC
AACGGCGCCA AGGTGTGGCT GAAGCTGCCG GGTTTCTCCA TTCAGCCCGG GGAGTTCGCG
AAGATCCTGT TGATGATCTT CTTCGCCGGT TTCCTGGTGT CGAAGCGCGA TCTGTTCATG
ACCGCGGGCA AGCGGGTGCT CGGGGTGGAA CTGCCGAGGG CCCGCGACCT GGGGCCGATC
ATCATCGCCG CTTTGGCCTG TCTCGGCATC CTCGTGTTCG AGAAGGACCT GGGAACGGCG
CTGCTCTTCT TCGGCATCGT GCTCATGATG CTGTACGTCG CCACCGAGCG GGTCATCTGG
GTGGTGCTCG GGCTGAGCAT GTTCTCGGTG GGCGGCATCA TCGCGTACTC ACTGTTCACC
CACGTGCAGC AGCGAGTGGC GAACTGGTTC GACCCGCTGG AGACCTACTA CGACCTCGGC
GGTGGTTACC AGATCGCGCA GGGTCTTTTC GGACTCGGGA CCGGCGGCAT GCTGGGCACG
GGGCTCGGAC TCGGCAGGCC CGACACCGTG CCCGAATCGC ACACCGACTT CATCAGCGCC
GCGCTCGGTG AAGAACTCGG GCTGGTGGGC CTGTCCGCGA TCCTGATCGT CTACCTGCTG
CTTTCCATGC GAGGCATGCG CAGCGCCCTC GCCGTCAGGG ACACGTTCGG CAAACTGCTC
GGCGGTGGCC TGTCCTTCGC TGTCATCATG CAGGTCTTCG TGATCGTCGG CGGTGTGACG
AAGCTGATTC CGATGACGGG GGTCACGACA CCGTTCTTGT CGGCGGGTGG ATCATCACTG
CTGGCGAACT ATGCACTCAT CGCGCTCCTG CTGCGGATCT CCGACGCGGC ACGGCGGCCG
CAACAGCCCG CCAAGCCCAA GCCCGCACCC CAGGCCCCGC TGGCGGAAGC GCACACGGTG
ATGGTTCAGC GCTCCATGGC CGGCCCGGTC ATCCCGGCCA GCCCGGCCGG TCCAGCCAAC
CCGGCCCAGC CGGGCCATCC GATGAATCCG GGTAACTCGG GCCATCCGAT GAATCCGGGT
CACCCGAACG TTCCGGGCAT GCCAGGCGCA CCGGGGACGA CGCATCCGCC GGAGGGGGGG
AGACAGCCGT GA
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| Protein sequence | MAQPAANPGA AAQYTTNPPR ELPKRRGTEL ALLAFSALIV TLAFVLVQAN QEQELSWSVV
WYGLAYLAIF GVAHLAVRRW APYADPLILP CVALLNGLGL VMIHRIDLAE AQRALANGGD
AAAYAPRQVL FTVIALAFFL GVLILVADHR KLTRYAYTCG LTGLVALALP AVLPSSLSEV
NGAKVWLKLP GFSIQPGEFA KILLMIFFAG FLVSKRDLFM TAGKRVLGVE LPRARDLGPI
IIAALACLGI LVFEKDLGTA LLFFGIVLMM LYVATERVIW VVLGLSMFSV GGIIAYSLFT
HVQQRVANWF DPLETYYDLG GGYQIAQGLF GLGTGGMLGT GLGLGRPDTV PESHTDFISA
ALGEELGLVG LSAILIVYLL LSMRGMRSAL AVRDTFGKLL GGGLSFAVIM QVFVIVGGVT
KLIPMTGVTT PFLSAGGSSL LANYALIALL LRISDAARRP QQPAKPKPAP QAPLAEAHTV
MVQRSMAGPV IPASPAGPAN PAQPGHPMNP GNSGHPMNPG HPNVPGMPGA PGTTHPPEGG
RQP
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