Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_00320 |
Symbol | |
ID | 8385370 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 27034 |
End bp | 27804 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644974136 |
Product | transcriptional regulator, tetR family |
Protein accession | YP_003131949 |
Protein GI | 257054117 |
COG category | |
COG ID | |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.48619 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.068604 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACAGACA GTCAACGCCC GGGAGCACGT CCTGATGCGC GTCCCGAGCT GCCCGGTGTC CTCGCCCGCA TGTGGGGGCG CGAGCCGACA CCTCGCCGGG GTCCGAAGCC GAGCCTCGAT CTCGCCCGGA TCACCGAAGC CGCCATCACG ATCGCCGACG CCGACGGTCT CGCCGCGGTT TCGATGAGCA GCGTCGCCTC TCGGCTCGGT GTCGCCCCGA TGTCGCTTTA TCGCTACGTG GACAGTAAGG ACGAACTGCT GCTCGCCATG CTCGACGCCG CGAGCGGCGA TCCGCCCCCC GTCGGCGGGC TCTCCCGGCG CGACTACCTC TTTCGGTGGA CCAAAGCCCA TGTCGAGACG TTCCTCGCCC GCCCCTGGCT GCTGTCCATC GCCCGAGGCG GTCCCCCGCT CGGCCCGCGG GGATTGCTGT GGCTCGAGCA GCTGCTCACC GCGCTCGACG ACACCCCACT CGACGGCGAG GAGAAGATCC TCATCGCCAC CACGCTCAGC GGCTACGCCC TCAACGAGGC GTCACTGATC ATCGCTTTGG AGCGATCGCC GAAGCAGGGC TCCCAACCCT CCAGCTCGGC CGCATACGGA GAGCTGATCG CCGAACTCGT GGATCGGAGG ACCTACCCGC GACTCGCGGA AATCGCCCGG GGCCACACCT TCGCCGCGGC AGAGGGCGCC TGGATCGACG AGAAGGACTT CCGATTCGGC CTCGACCTGC TCCTCGACGG CATCGACGCG TTGATCGCGC GTCGTTCGTG A
|
Protein sequence | MTDSQRPGAR PDARPELPGV LARMWGREPT PRRGPKPSLD LARITEAAIT IADADGLAAV SMSSVASRLG VAPMSLYRYV DSKDELLLAM LDAASGDPPP VGGLSRRDYL FRWTKAHVET FLARPWLLSI ARGGPPLGPR GLLWLEQLLT ALDDTPLDGE EKILIATTLS GYALNEASLI IALERSPKQG SQPSSSAAYG ELIAELVDRR TYPRLAEIAR GHTFAAAEGA WIDEKDFRFG LDLLLDGIDA LIARRS
|
| |