| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_00300 |
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| Symbol | |
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| ID | 8385368 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 25957 |
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| End bp | 26853 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644974134 |
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| Product | sortase (surface protein transpeptidase) |
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| Protein accession | YP_003131947 |
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| Protein GI | 257054115 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3764] Sortase (surface protein transpeptidase) |
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| TIGRFAM ID | [TIGR01076] LPXTG-site transpeptidase (sortase) family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.506527 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.0714167 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGACGAGG TCGAGGACGA GCCGATCGCC GAGGACTCGC CCGTCGACCC GCCGCAGGAC
ACGGAGCCGC CCACGTCTGC ACCGAAACCC GCGAAAGGCG GTTCCGGGGG TGGGATACGC
ACGGCCGTGC GCACCTTCGG GGAGATCCTG ATCACCCTCG GGATCGTCGT GCTGCTGTTC
GTGGTGTACG AGCTGTACGT CACCAACCTC ATGTCGCAGC GGTTGCAGGA CCAGGCGAGC
GCGGAACTCG AGGAGCGGTG GTCACAGCAG CGCGAGATCC ATGCCGAACC CATGGACGGT
GAAGCCTTCG CGCGTATCTA CATCCCGTCG TTCGGGGTCG ACTGGAACTT CACCATCCAG
CGGGGCGTGG ATTCCGCGAC GTTGGAGGTG GGCCCGGGCC ATTACAAGCA GACCGCCATG
CCCGGGGAAC AGGGCAACTT CGCCGTCGCG GGACACCGGG TGGGTAAAGG CGCTCCGTTC
AACGACCTGG ACCTGCTCTC CTCCTGCGAC GCCGTGGTGA TCGAGACCAT CGACAGCTTC
TACGTGTACC GCGTGCTGCC GATGAGTGAC GAGGTGCAGG GTTGGGCGCA GGGTAAGGGC
GCCGATCCGC GCTGCGCCGG GGTGAGGCCG CTGGCCGAGT ACGACCCGGT GTACAGCGAG
ACGGTCGGTC GACGCATCGT TCTCCCCGAC CGGGGCGATG CCGTGGCGCC GGTGCCGTAT
CGCCCCGATG CGGACCTTCC CGAGGCCAAC CGCGTGGAAC TGCTGACCCT GACCACGTGT
CATCCCCGTT TCTCCGACCG GGAACGCATG ATCATCCATG GGGTGCTGAC CGCGGTGTAC
GAGAAGGAAG CGGGAGCGAC GTACGAGCAG TTGCTGAAGG AGATCGGGGA GGCCTGA
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| Protein sequence | MDEVEDEPIA EDSPVDPPQD TEPPTSAPKP AKGGSGGGIR TAVRTFGEIL ITLGIVVLLF
VVYELYVTNL MSQRLQDQAS AELEERWSQQ REIHAEPMDG EAFARIYIPS FGVDWNFTIQ
RGVDSATLEV GPGHYKQTAM PGEQGNFAVA GHRVGKGAPF NDLDLLSSCD AVVIETIDSF
YVYRVLPMSD EVQGWAQGKG ADPRCAGVRP LAEYDPVYSE TVGRRIVLPD RGDAVAPVPY
RPDADLPEAN RVELLTLTTC HPRFSDRERM IIHGVLTAVY EKEAGATYEQ LLKEIGEA
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