Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_00200 |
Symbol | |
ID | 8385358 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 17237 |
End bp | 18430 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644974124 |
Product | predicted membrane protein |
Protein accession | YP_003131937 |
Protein GI | 257054105 |
COG category | [S] Function unknown |
COG ID | [COG2311] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.220914 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAACCACG AAAGACCGAA CTCCTCCGCC TCACCGGGTG GTACGCGTAT CGACGCACTC GACCTCGCCA GAGGCATCGC CATCCTCGGG ACCCTCGGCA CCAACATCTG GATCTTCACC GATCCGGCGG GTGCGTTCGG GTGGGTCTCG CCGCAAGGCG ACGGTCCCGT CGAGGGGGTC GTCGAGACGT TGCTGCTCAC GCTGTCGAAC GGCAAGTTCC TCGCACTGTT GTCGATCCTT TTCGGGGTCG GACTGGAATT GCAGTACCGC TCGGCGGCGC GACGAGGGCG ACGTTGGCCG GGCAGGTACC TGCTGCGAGC GCTGTTGCTG TTCGTCGAAG GCCTACTGCA CTACTTACTG ATCTTCGAGT TCGACGTACT CACCGGCTAT GCGATCGTCT CGGTACACGT CGCGTTCCTG GTAGCACGCA GGGACCGCGT GCGACGGACG TGGCTGGCCA TAGCCGCCGC TGTGCACCTG CTGTTGATCG GGTTCCTGAC GTCGGTGCTG CTCACCGGGA ACATCACACT GTCCGGCGAA GAACAGACGA CGACCGATCT CTACACATCG GCGAGCTGGG CTGAACAGGT ACTGACACGC ATCGAACTGG CCGGCATGTT CCGCGCCGAA CTGATTATCA TCATCCCACT GTCCACAGTG CTGTTCCTGG CGGGAATCGA GGTGCTGCGC GCGGGTACGT TCGAGGCGAG TGAACGCGGG AAGCACGTGC GGCGTCGGAT GCTCGTTCTC GGGCTCGGCA TCGGTTTTCC ACTGAACCTC GTGACCGCTT TCGCGGGAGT CGAGTGGTTC TTCGTCGACC GCTATGTCCT GCCGCCTATC GTCGCTTTCG GACTATTGGC GGCCATTGTG GAGGCCGCCG AGCGCACACG TGGGGGCCTG CTGAGAAAAG GACTCATCGC GACGGGCCGG ACCGCCATGA CGTGTTACGT GTTCCAGAAC CTGATATGCA GTGTGCTCTG CTACGGCTGG GGGCTGGGTC TCGCGGTGAC CTTCGCGGAC GCTGGACCGT GGTGGGTCGT GGCGCTCTGG GCCGGCGTGG TGGCGTTGTT CATGTCGCTG GCATGGCTGT GGCTGCGACG CTTCACCCGC GGACCACTGG AGCTGATTCT ACACCGAGTC TACAGCGGAC GACGCGCTCG GGAGAGTACC GATCGGATTC CCGTGCGGGA GTAG
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Protein sequence | MNHERPNSSA SPGGTRIDAL DLARGIAILG TLGTNIWIFT DPAGAFGWVS PQGDGPVEGV VETLLLTLSN GKFLALLSIL FGVGLELQYR SAARRGRRWP GRYLLRALLL FVEGLLHYLL IFEFDVLTGY AIVSVHVAFL VARRDRVRRT WLAIAAAVHL LLIGFLTSVL LTGNITLSGE EQTTTDLYTS ASWAEQVLTR IELAGMFRAE LIIIIPLSTV LFLAGIEVLR AGTFEASERG KHVRRRMLVL GLGIGFPLNL VTAFAGVEWF FVDRYVLPPI VAFGLLAAIV EAAERTRGGL LRKGLIATGR TAMTCYVFQN LICSVLCYGW GLGLAVTFAD AGPWWVVALW AGVVALFMSL AWLWLRRFTR GPLELILHRV YSGRRAREST DRIPVRE
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