Gene Svir_00080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_00080 
Symbol 
ID8385346 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp11657 
End bp12403 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content70% 
IMG OID644974114 
Producthypothetical protein 
Protein accessionYP_003131929 
Protein GI257054097 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.852308 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.387061 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACACCAC CTGACAACAC CGAACAGCGC GAACCCGGTG GCACGGACAC CACCACGGGA 
GAGGTTCCGC CGTGGCAGAG GGTGGCCAAG GACGGCTCGG CTGGGACGTC GGACGGTGAC
GAGGGGGCCA CGCAGTGGCT GACGAGCCCG GTGAGCGCCG GGGCGTCGAC GGTGCCACCC
GCCCCGGGCG CGGGAGGCGG GGGCGCGCAG CCGCCGCAGC AGCCCGGGGG TGAGGGGTCG
GCGTTCGGAC AAGGGGCGGT CGCCAACCGG CTGTTCGGTC AAGGCGAGCA GTCGGCGACG
CGGACCGCTC AGCCTCAGGG ATCCGATGCC GGGAAGTCGG GTTCGGGAAC GCAGTCGCTG
AGCGCCTTCC GTAGGCCCGG GCGCGGGCCC AGGCGGGCGA ATCTCCAGGT GCGGCGGGTG
GACCCATGGT CGGTACTGAA GCTGTCCCTG GTGCTCGGCG TGGCGTTGTT CTTCATCTGG
CTCGTCGCCG TCGGTGTGTT GTACACGGTG CTCGACGGCA TGGGCGTGTG GGACAGCATC
AACGGCACGT ACGACTCGCT GGTGGCCAAC GACGCCGTCG ACGGTGATGT GCTCATCACG
GCGGGCACGG TGTTCGGCGC GGCCGCGATC GTCGGTGCGG TGAACATCGT CCTGATCTCG
GCGCTGGCCA CGGTCGGGGC GTTCATCTAC AACGTGTCCG CCGGACTCTC CGGTGGGCTC
GAGCTCACGC TTTCCGAGCG AGAGTGA
 
Protein sequence
MTPPDNTEQR EPGGTDTTTG EVPPWQRVAK DGSAGTSDGD EGATQWLTSP VSAGASTVPP 
APGAGGGGAQ PPQQPGGEGS AFGQGAVANR LFGQGEQSAT RTAQPQGSDA GKSGSGTQSL
SAFRRPGRGP RRANLQVRRV DPWSVLKLSL VLGVALFFIW LVAVGVLYTV LDGMGVWDSI
NGTYDSLVAN DAVDGDVLIT AGTVFGAAAI VGAVNIVLIS ALATVGAFIY NVSAGLSGGL
ELTLSERE