Gene Svir_00080 details

Gene Information

• Locus tag: Svir_00080
• ID: 8385346
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Saccharomonospora viridis DSM 43017
• Kingdom: Bacteria
• Replicon accession: NC_013159
• Strand: +
• Start bp: 11657
• End bp: 12403
• Gene Length: 747 bp
• Protein Length: 248 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 644974114
• Product: hypothetical protein
• Protein accession: YP_003131929
• Protein GI: 257054097

Plasmid Coverage information

• Num covering plasmid clones: 30
• Plasmid unclonability p-value: 0.852308
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 23
• Fosmid unclonability p-value: 0.387061
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

GTGACACCAC CTGACAACAC CGAACAGCGC GAACCCGGTG GCACGGACAC CACCACGGGA 
GAGGTTCCGC CGTGGCAGAG GGTGGCCAAG GACGGCTCGG CTGGGACGTC GGACGGTGAC 
GAGGGGGCCA CGCAGTGGCT GACGAGCCCG GTGAGCGCCG GGGCGTCGAC GGTGCCACCC 
GCCCCGGGCG CGGGAGGCGG GGGCGCGCAG CCGCCGCAGC AGCCCGGGGG TGAGGGGTCG 
GCGTTCGGAC AAGGGGCGGT CGCCAACCGG CTGTTCGGTC AAGGCGAGCA GTCGGCGACG 
CGGACCGCTC AGCCTCAGGG ATCCGATGCC GGGAAGTCGG GTTCGGGAAC GCAGTCGCTG 
AGCGCCTTCC GTAGGCCCGG GCGCGGGCCC AGGCGGGCGA ATCTCCAGGT GCGGCGGGTG 
GACCCATGGT CGGTACTGAA GCTGTCCCTG GTGCTCGGCG TGGCGTTGTT CTTCATCTGG 
CTCGTCGCCG TCGGTGTGTT GTACACGGTG CTCGACGGCA TGGGCGTGTG GGACAGCATC 
AACGGCACGT ACGACTCGCT GGTGGCCAAC GACGCCGTCG ACGGTGATGT GCTCATCACG 
GCGGGCACGG TGTTCGGCGC GGCCGCGATC GTCGGTGCGG TGAACATCGT CCTGATCTCG 
GCGCTGGCCA CGGTCGGGGC GTTCATCTAC AACGTGTCCG CCGGACTCTC CGGTGGGCTC 
GAGCTCACGC TTTCCGAGCG AGAGTGA 

 

Protein sequence

MTPPDNTEQR EPGGTDTTTG EVPPWQRVAK DGSAGTSDGD EGATQWLTSP VSAGASTVPP 
APGAGGGGAQ PPQQPGGEGS AFGQGAVANR LFGQGEQSAT RTAQPQGSDA GKSGSGTQSL 
SAFRRPGRGP RRANLQVRRV DPWSVLKLSL VLGVALFFIW LVAVGVLYTV LDGMGVWDSI 
NGTYDSLVAN DAVDGDVLIT AGTVFGAAAI VGAVNIVLIS ALATVGAFIY NVSAGLSGGL 
ELTLSERE