Gene Svir_00070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_00070 
Symbol 
ID8385345 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp9100 
End bp11625 
Gene Length2526 bp 
Protein Length841 aa 
Translation table11 
GC content66% 
IMG OID644974113 
ProductDNA gyrase subunit A 
Protein accessionYP_003131928 
Protein GI257054096 
COG category[L] Replication, recombination and repair 
COG ID[COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit 
TIGRFAM ID[TIGR01063] DNA gyrase, A subunit 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0318292 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.41561 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGAAA CTCTGCCGCC CAACTCCCGA GGCCGTGTCG AGCCCGTCGA CATCCAACAG 
GAGATGCAGA ACTCCTACAT CAATTACGCG ATGAGCGTGA TTGTGTCGCG GGCTCTGCCG
GACGTGCGTG ACGGGCTGAA GCCGGTGCAC CGCCGTGTCC TGTACTCGAT GTACGACTCC
GGGTTCCGGC CCGACCGCGG CTACAACAAG TGCTCCCGGG TCGTCGGCGA CGTGATGGGT
AACTACCACC CGCACGGTGA CTCGGCGATC TACGACGCGC TGGTACGACT GGCCCAGCGG
TGGTCGATGC GGTACCCGCT GATCGACGGC CAGGGCAACT TCGGCTCGCC CGGTAACGAC
CCGGCGGCCG CCATGCGGTA CACCGAGGCA CGCCTCGACC CGCTCGCGAT GGAGATGCTG
CGGGACATCG AGGAAGACAC GGTCGATTTC TCCGACAACT ACGACGGGCG TACGCAGGAA
CCTGACGTTC TGCCGAGTCG TATCCCGAAC CTGCTGGTCA ACGGTGGTTC GGGGATCGCC
GTCGGGATGG CGACCAACAT CCCTCCACAC AACCTGCGCG AGGTCGTCGA CGGCGTGATC
TGGGCGTTGG ACAACCCGGA CGCCGACGAG GAGGAGACGC TCGCCGCCTT GATGCAGCGC
ATCAAGGGCC CGGACTTCCC GACGAGCGGC CAGATCCTCG GCACGCAGGG CATCGCCGAC
GCCTACCGCA CGGGCCGTGG GTCCATCCGG ATGCGCGCCG TGGTGGAGGT CGAGGAGGAC
GCCAAGGGGC GGACCACCCT CGTCGTCACC GAGCTGCCGT ACCAGGTGAA CCCGGACAAC
CTGGTGGAGA ACATCGCGTC GCTGGCGCGA GACGGCAAGA TCGCCGGCAT CGCGGACATC
GCCGACGAGA GCAACAGCCG GGGCGGCATG CGCATCGTGA TCACGTTGAA ACGTGACGCG
GTGGCGAAGG TGGTGCTGAA CAACCTCTAC AAGCACACCC AGCTGCAGTA CAACTTCGGC
GTCAACATGC TCGCGCTGGT GGACGGTGTG CCGCGCACCC TCCGGCTCGA CCAGATGGTG
CGGCATTACG TCAACCACCA GATCGATGTC ATCGTCCGGC GTACCCGCTA CCGGTTGCGT
AAGGCCGAGG AGCGCGCTCA CGTCCTCCGT GGACTGGCCA AGGCACTCGA CCACCTCGAC
GCCGTGATCG AGCTGATCCG TCGTTCGCCG AACGCGGACG AGGCGCGCAC GGGTTTGATG
GAGCTGCTGG ACATCGACGA GGTCCAGGCC ACGGCCATCC TCGACATGCA GCTGCGCAAG
CTCGCCGCAC TGGAACGGCA GCGCATCCTC GACGAGCTGG CCGAACTCGA GGCGAAGATC
GCCGACCTGC AGGACGTCCT GGACAAGCCG GAGCGGCAGC GGGAGATCGT CCGCACCGAG
TTGTTGGAGA TCACCGAGAA GTACGGCGAC GACAGGCGAA CGAAGATCAT CCCGTACGAG
GGCGACGTCT CGATCGAGGA CCTGATCGCC GAAGAGGACG TCGTCGTCAC GATCACCCGC
ACCGGATACG CGAAGCGGAC GAAGACCGAC CTGTACCGCT CGCAGAAGCG CGGCGGCAAG
GGCGTGCAGG GAGCCACGCT CAAACAGGAC GACATCGTGG AGCACTTCTT CGTGTGCTCG
ACGCATGACT GGGTCCTGTT CTTCACCAAC AAGGGTCGGG TGTATCGCGC GAAGGCGTAC
GACCTGCCCG AGGCCAACCG CAACGCCCGC GGTCAGCACG TGGCGAACCT GCTGGCGTTC
CAACCGGACG AGCGCATCGC GAGTGTCATC CAGATCCCGA ACTACGAGGT CGCGCCGTAT
CTGATCCTGG GCACCAAGAA GGGCCTGGTG AAGAAGTCGC GGCTCGCCGA TTTCGACTCG
CCGCGCTCCG GTGGCCTCAT CGGCATCAAC CTGCGTGAGG GTGACGAGCT GGTGGGAGCC
GTGCTCGCCT CGGCCGAGGA CGACCTGCTG CTCGTGTCGT CCGACGGGCA GTCCATCCGG
TTCCACGCCA ACGACGAGGT GCTGCGCCCG ATGGGCAGGG CGACCTCGGG CGTGCTGGGG
ATGCGCTTCA ACGAGGGCGC CGAACTGCTC AGCATCAACG TGATCAAACC CGGCACGTTC
CTGTTGGTGG CCACCGAAGG CGGTTACGCC AAGCGCACCG CCGTCGAGGA CTATCCGGTG
CAGGGTCGTG GCGGCAAGGG TGTGCTCACC ATTCAGCACG ACGAAAAGCG TGGCAGGCTT
GTGGCTGCGC TCATCGTCGA CGCAGACGAC GAGTTGTATG CCATTACGTC CAGCGGTGGG
GTGATCAGGA CGCCCGCGGC CGAGGTTCGT CGGGCCAGTA GGCAGACCAA GGGTGTCCGG
TTGATTAACC TTGGAGAGGG GAACACTCTG CTGGCCGTGG CACGCAACGC GGACCGGCCG
TCGGACGTCT CGGCAGAGGA GGCCGAGTCC ACGGGCGAGG CCGTGCCGGA ACCGGAACAA
CAGTAG
 
Protein sequence
MTETLPPNSR GRVEPVDIQQ EMQNSYINYA MSVIVSRALP DVRDGLKPVH RRVLYSMYDS 
GFRPDRGYNK CSRVVGDVMG NYHPHGDSAI YDALVRLAQR WSMRYPLIDG QGNFGSPGND
PAAAMRYTEA RLDPLAMEML RDIEEDTVDF SDNYDGRTQE PDVLPSRIPN LLVNGGSGIA
VGMATNIPPH NLREVVDGVI WALDNPDADE EETLAALMQR IKGPDFPTSG QILGTQGIAD
AYRTGRGSIR MRAVVEVEED AKGRTTLVVT ELPYQVNPDN LVENIASLAR DGKIAGIADI
ADESNSRGGM RIVITLKRDA VAKVVLNNLY KHTQLQYNFG VNMLALVDGV PRTLRLDQMV
RHYVNHQIDV IVRRTRYRLR KAEERAHVLR GLAKALDHLD AVIELIRRSP NADEARTGLM
ELLDIDEVQA TAILDMQLRK LAALERQRIL DELAELEAKI ADLQDVLDKP ERQREIVRTE
LLEITEKYGD DRRTKIIPYE GDVSIEDLIA EEDVVVTITR TGYAKRTKTD LYRSQKRGGK
GVQGATLKQD DIVEHFFVCS THDWVLFFTN KGRVYRAKAY DLPEANRNAR GQHVANLLAF
QPDERIASVI QIPNYEVAPY LILGTKKGLV KKSRLADFDS PRSGGLIGIN LREGDELVGA
VLASAEDDLL LVSSDGQSIR FHANDEVLRP MGRATSGVLG MRFNEGAELL SINVIKPGTF
LLVATEGGYA KRTAVEDYPV QGRGGKGVLT IQHDEKRGRL VAALIVDADD ELYAITSSGG
VIRTPAAEVR RASRQTKGVR LINLGEGNTL LAVARNADRP SDVSAEEAES TGEAVPEPEQ
Q