Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_00070 |
Symbol | |
ID | 8385345 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 9100 |
End bp | 11625 |
Gene Length | 2526 bp |
Protein Length | 841 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644974113 |
Product | DNA gyrase subunit A |
Protein accession | YP_003131928 |
Protein GI | 257054096 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
TIGRFAM ID | [TIGR01063] DNA gyrase, A subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0318292 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.41561 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCGAAA CTCTGCCGCC CAACTCCCGA GGCCGTGTCG AGCCCGTCGA CATCCAACAG GAGATGCAGA ACTCCTACAT CAATTACGCG ATGAGCGTGA TTGTGTCGCG GGCTCTGCCG GACGTGCGTG ACGGGCTGAA GCCGGTGCAC CGCCGTGTCC TGTACTCGAT GTACGACTCC GGGTTCCGGC CCGACCGCGG CTACAACAAG TGCTCCCGGG TCGTCGGCGA CGTGATGGGT AACTACCACC CGCACGGTGA CTCGGCGATC TACGACGCGC TGGTACGACT GGCCCAGCGG TGGTCGATGC GGTACCCGCT GATCGACGGC CAGGGCAACT TCGGCTCGCC CGGTAACGAC CCGGCGGCCG CCATGCGGTA CACCGAGGCA CGCCTCGACC CGCTCGCGAT GGAGATGCTG CGGGACATCG AGGAAGACAC GGTCGATTTC TCCGACAACT ACGACGGGCG TACGCAGGAA CCTGACGTTC TGCCGAGTCG TATCCCGAAC CTGCTGGTCA ACGGTGGTTC GGGGATCGCC GTCGGGATGG CGACCAACAT CCCTCCACAC AACCTGCGCG AGGTCGTCGA CGGCGTGATC TGGGCGTTGG ACAACCCGGA CGCCGACGAG GAGGAGACGC TCGCCGCCTT GATGCAGCGC ATCAAGGGCC CGGACTTCCC GACGAGCGGC CAGATCCTCG GCACGCAGGG CATCGCCGAC GCCTACCGCA CGGGCCGTGG GTCCATCCGG ATGCGCGCCG TGGTGGAGGT CGAGGAGGAC GCCAAGGGGC GGACCACCCT CGTCGTCACC GAGCTGCCGT ACCAGGTGAA CCCGGACAAC CTGGTGGAGA ACATCGCGTC GCTGGCGCGA GACGGCAAGA TCGCCGGCAT CGCGGACATC GCCGACGAGA GCAACAGCCG GGGCGGCATG CGCATCGTGA TCACGTTGAA ACGTGACGCG GTGGCGAAGG TGGTGCTGAA CAACCTCTAC AAGCACACCC AGCTGCAGTA CAACTTCGGC GTCAACATGC TCGCGCTGGT GGACGGTGTG CCGCGCACCC TCCGGCTCGA CCAGATGGTG CGGCATTACG TCAACCACCA GATCGATGTC ATCGTCCGGC GTACCCGCTA CCGGTTGCGT AAGGCCGAGG AGCGCGCTCA CGTCCTCCGT GGACTGGCCA AGGCACTCGA CCACCTCGAC GCCGTGATCG AGCTGATCCG TCGTTCGCCG AACGCGGACG AGGCGCGCAC GGGTTTGATG GAGCTGCTGG ACATCGACGA GGTCCAGGCC ACGGCCATCC TCGACATGCA GCTGCGCAAG CTCGCCGCAC TGGAACGGCA GCGCATCCTC GACGAGCTGG CCGAACTCGA GGCGAAGATC GCCGACCTGC AGGACGTCCT GGACAAGCCG GAGCGGCAGC GGGAGATCGT CCGCACCGAG TTGTTGGAGA TCACCGAGAA GTACGGCGAC GACAGGCGAA CGAAGATCAT CCCGTACGAG GGCGACGTCT CGATCGAGGA CCTGATCGCC GAAGAGGACG TCGTCGTCAC GATCACCCGC ACCGGATACG CGAAGCGGAC GAAGACCGAC CTGTACCGCT CGCAGAAGCG CGGCGGCAAG GGCGTGCAGG GAGCCACGCT CAAACAGGAC GACATCGTGG AGCACTTCTT CGTGTGCTCG ACGCATGACT GGGTCCTGTT CTTCACCAAC AAGGGTCGGG TGTATCGCGC GAAGGCGTAC GACCTGCCCG AGGCCAACCG CAACGCCCGC GGTCAGCACG TGGCGAACCT GCTGGCGTTC CAACCGGACG AGCGCATCGC GAGTGTCATC CAGATCCCGA ACTACGAGGT CGCGCCGTAT CTGATCCTGG GCACCAAGAA GGGCCTGGTG AAGAAGTCGC GGCTCGCCGA TTTCGACTCG CCGCGCTCCG GTGGCCTCAT CGGCATCAAC CTGCGTGAGG GTGACGAGCT GGTGGGAGCC GTGCTCGCCT CGGCCGAGGA CGACCTGCTG CTCGTGTCGT CCGACGGGCA GTCCATCCGG TTCCACGCCA ACGACGAGGT GCTGCGCCCG ATGGGCAGGG CGACCTCGGG CGTGCTGGGG ATGCGCTTCA ACGAGGGCGC CGAACTGCTC AGCATCAACG TGATCAAACC CGGCACGTTC CTGTTGGTGG CCACCGAAGG CGGTTACGCC AAGCGCACCG CCGTCGAGGA CTATCCGGTG CAGGGTCGTG GCGGCAAGGG TGTGCTCACC ATTCAGCACG ACGAAAAGCG TGGCAGGCTT GTGGCTGCGC TCATCGTCGA CGCAGACGAC GAGTTGTATG CCATTACGTC CAGCGGTGGG GTGATCAGGA CGCCCGCGGC CGAGGTTCGT CGGGCCAGTA GGCAGACCAA GGGTGTCCGG TTGATTAACC TTGGAGAGGG GAACACTCTG CTGGCCGTGG CACGCAACGC GGACCGGCCG TCGGACGTCT CGGCAGAGGA GGCCGAGTCC ACGGGCGAGG CCGTGCCGGA ACCGGAACAA CAGTAG
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Protein sequence | MTETLPPNSR GRVEPVDIQQ EMQNSYINYA MSVIVSRALP DVRDGLKPVH RRVLYSMYDS GFRPDRGYNK CSRVVGDVMG NYHPHGDSAI YDALVRLAQR WSMRYPLIDG QGNFGSPGND PAAAMRYTEA RLDPLAMEML RDIEEDTVDF SDNYDGRTQE PDVLPSRIPN LLVNGGSGIA VGMATNIPPH NLREVVDGVI WALDNPDADE EETLAALMQR IKGPDFPTSG QILGTQGIAD AYRTGRGSIR MRAVVEVEED AKGRTTLVVT ELPYQVNPDN LVENIASLAR DGKIAGIADI ADESNSRGGM RIVITLKRDA VAKVVLNNLY KHTQLQYNFG VNMLALVDGV PRTLRLDQMV RHYVNHQIDV IVRRTRYRLR KAEERAHVLR GLAKALDHLD AVIELIRRSP NADEARTGLM ELLDIDEVQA TAILDMQLRK LAALERQRIL DELAELEAKI ADLQDVLDKP ERQREIVRTE LLEITEKYGD DRRTKIIPYE GDVSIEDLIA EEDVVVTITR TGYAKRTKTD LYRSQKRGGK GVQGATLKQD DIVEHFFVCS THDWVLFFTN KGRVYRAKAY DLPEANRNAR GQHVANLLAF QPDERIASVI QIPNYEVAPY LILGTKKGLV KKSRLADFDS PRSGGLIGIN LREGDELVGA VLASAEDDLL LVSSDGQSIR FHANDEVLRP MGRATSGVLG MRFNEGAELL SINVIKPGTF LLVATEGGYA KRTAVEDYPV QGRGGKGVLT IQHDEKRGRL VAALIVDADD ELYAITSSGG VIRTPAAEVR RASRQTKGVR LINLGEGNTL LAVARNADRP SDVSAEEAES TGEAVPEPEQ Q
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