Gene Huta_3016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_3016 
Symbol 
ID8385325 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand
Start bp3107314 
End bp3108411 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content66% 
IMG OID644974094 
ProductNADH:flavin oxidoreductase/NADH oxidase 
Protein accessionYP_003131910 
Protein GI257054077 
COG category[C] Energy production and conversion 
COG ID[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.824426 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACCCG ACCTTTTCTC GCCGCTCGAA ATGCGCGACG TGACTGCCCC GAATCGCGTG 
ATGGTCTCGC CGATGTGTCA GTATTCCTGT GATGACCGTG ATGGTCTCCC GACCGACTGG
CACCGCGTCC ACCTCGGCAG CCGAGCCGTC GGCGGTGCGG GGATCGTCAT GACCGAGGCG
ACTGCCGTCG AGCCGCGGGG ACGGATCTCC CCCGAAGATA CCGGAATCTG GTCGGACGAA
CACGTCCGGG CCTGGCAGCC GATCACAGAC ATCATCGCCG ACCAGGGCTC GATTCCGGCG
ATTCAACTCG CCCACGCCGG TCGGAAGGCC TCCAAGAGCC GACCCTGGGA CGGCAGCGCA
CCCGTTCGAC CGGACGCCGG TGGCTGGGAG ACGATCGGCC CGAGCGGGAC CGCCTGGCCG
TACGACGCCG AGGCCCCACC GCATCGACGG ATGGATACCG ACGATATCGA GGCCGTCGTC
GAGTCCTTCC GGGCCGGGGC CAAGCGGTCA CTCGCCGCGG GCTTCGAGAT CGCCGAAGTC
CACGCCGCCC ACGGCTATCT CCTCCACGAG TTTCTCTCGC CGGCCACGAA CGATCGTACC
GACGAGTACG GGGGTAGTTT CGAGGATCGG ACCCGACTAC TCCGGGAGGT TGTCACTGCG
GTCAGGGATG TCTGGCCCGA CGACAAGCCA GTCTTCGTCC GGATCTCCGC GACCGACTGG
ATCGACGATG GCGAATCCTG GACGGTCGAA CAGTCGGTCC GACTCGCCGG CGATCTCTTC
GAGGCCGGCG TCGATCTGAT CGACGTGAGT TCCGGCGGGA TCCGGCCGGG TTCGTATCCC
GACGCGGACG GCCCGAACTA TCAGGTGCCG TTCGCGGAGC GGATCAACGA GCACACGCCA
GCGGGACTTC GTGTTGGGGC TGTCGGAAAG ATCACGACAC CCGAGCAGGC CGACGCCATC
GTCGCCAACG GCCGTGCGGA TCTCGCGATC GTGGGTCGAG AGCTCCTCAG AGACCCATAC
TTCACCATCC GCGCTGCCGA TGCACTCGAT GCGCTGGATC GCGTTGCCGT TCCACCGCAG
TACGACCGGG CGTTCTGA
 
Protein sequence
MTPDLFSPLE MRDVTAPNRV MVSPMCQYSC DDRDGLPTDW HRVHLGSRAV GGAGIVMTEA 
TAVEPRGRIS PEDTGIWSDE HVRAWQPITD IIADQGSIPA IQLAHAGRKA SKSRPWDGSA
PVRPDAGGWE TIGPSGTAWP YDAEAPPHRR MDTDDIEAVV ESFRAGAKRS LAAGFEIAEV
HAAHGYLLHE FLSPATNDRT DEYGGSFEDR TRLLREVVTA VRDVWPDDKP VFVRISATDW
IDDGESWTVE QSVRLAGDLF EAGVDLIDVS SGGIRPGSYP DADGPNYQVP FAERINEHTP
AGLRVGAVGK ITTPEQADAI VANGRADLAI VGRELLRDPY FTIRAADALD ALDRVAVPPQ
YDRAF