| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_3003 |
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| Symbol | |
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| ID | 8385312 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhabdus utahensis DSM 12940 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013158 |
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| Strand | - |
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| Start bp | 3094152 |
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| End bp | 3095393 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644974081 |
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| Product | glutamyl-tRNA(Gln) amidotransferase subunit D |
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| Protein accession | YP_003131897 |
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| Protein GI | 257054064 |
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| COG category | [E] Amino acid transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0252] L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D |
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| TIGRFAM ID | [TIGR00519] L-asparaginases, type I
[TIGR02153] glutamyl-tRNA(Gln) amidotransferase, subunit D |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0272423 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCCAG GAGATCGCGT GGCAGTCGAG GATGGCGAGC GGACGTTCGA GGGCGTGTTA
CTCCCCTCGA CGGACACGGA GACGCTCGTC GTCAAGCTTC CGAGCGGCTA CAACGTCGGG
GTCGATCGCG AAGCTGCCGA AGCCGACGTT CTGGAATCGG ACGTCTACGA CATCGAACCC
GGCGAGGCGA GCGAGGAATC GAAGATCGAG TTCGACGAAG ACCTCCCGAC GATATCACTC
ATCTCGACGG GCGGCACCAT CGCCTCGACG GTCGACTACC GCACCGGCGC GGTCACCGCC
CAGTTCGACG CCGAGGACGT GCTCCGGGCC GTCCCCGAAC TCGCCGGCCT GGCCAACTAC
CGTGGGCGCG TCGTCGCGAA CATCCTCAGC GAGAACATGA CCCCTGACGT GTGGGTCGAC
CTCGCCGAAG CTATCCACGA GGAGATCGAA GCGGGGGCCG ACGGCGTCGT CGTCATGCAC
GGCACAGACA CGATGCAGTT CTCCGCGAGC GCCATGGCGT TCATGCTCGA AACTCCCGTC
CCCATCGTCT TCACCGGCAG CCAGCGCTCG GCCGATCGCC CCTCCTCGGA CAACGTGATG
AACGCGGTAA GTGCCGTCGA GGCCGCCAAA AGTGACGCCG CGGAGGTCAT GATCTGCATG
CACGCAACCG AGAGCGACGA CGCCTGTGCG CTCCACCGCG GGACCCGCGC CCGGAAGAAC
CACACCTCCC GGCGGGACGC CTTCGAGACG ATCAGCCGGG CACCACTGGG GGAAGTCGAC
TACGACTCCC GGACGGTCAC GTTCCGCCGG GAGTACGCCG AGCGCGGCGA GACGGATCTC
GCACTCCAGG ACGATCTGGA AACCGACGTT GACCTCGTGA AATTCACGCC CGGTGCGGGG
CCATCGATGC TCGACCCCGT CGAGGGGGCG GCCGGCGTCG TGATCGAAGG GACCGGCCTG
GGCCACGTCA ACACGGACTG GATCGACCGG ATCGACGCGT TGGTCGAGGA CGGGACGGCG
GTCGTGATGA CCAGCCAGTG CATCGACGGG CGGGTCTGCG ATCGCGTCTA CGACACCGGT
CGCGATCTCC TTGACGCCGG CGTGATAGAG GGTGAGGATA TGCTCCCGGG AACGGCAATG
GTCAAGCTCA TGTGGGTGCT GGCCAACCGC GACGATCCGG CGGCAGCCAT GGGCGAACCG
CTGGCCGGCG AGATCACCGA GCGGTCGACG CCCTGGGAGT GA
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| Protein sequence | MNPGDRVAVE DGERTFEGVL LPSTDTETLV VKLPSGYNVG VDREAAEADV LESDVYDIEP
GEASEESKIE FDEDLPTISL ISTGGTIAST VDYRTGAVTA QFDAEDVLRA VPELAGLANY
RGRVVANILS ENMTPDVWVD LAEAIHEEIE AGADGVVVMH GTDTMQFSAS AMAFMLETPV
PIVFTGSQRS ADRPSSDNVM NAVSAVEAAK SDAAEVMICM HATESDDACA LHRGTRARKN
HTSRRDAFET ISRAPLGEVD YDSRTVTFRR EYAERGETDL ALQDDLETDV DLVKFTPGAG
PSMLDPVEGA AGVVIEGTGL GHVNTDWIDR IDALVEDGTA VVMTSQCIDG RVCDRVYDTG
RDLLDAGVIE GEDMLPGTAM VKLMWVLANR DDPAAAMGEP LAGEITERST PWE
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