| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_2986 |
|---|
| Symbol | |
|---|
| ID | 8385295 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhabdus utahensis DSM 12940 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013158 |
|---|
| Strand | + |
|---|
| Start bp | 3075234 |
|---|
| End bp | 3076577 |
|---|
| Gene Length | 1344 bp |
|---|
| Protein Length | 447 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 644974064 |
|---|
| Product | FAD dependent oxidoreductase |
|---|
| Protein accession | YP_003131880 |
|---|
| Protein GI | 257054047 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0579] Predicted dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.193305 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGGCG AATACGACCT GATCATCGTC GGCGGGGGTA TCAGTGGCGC ATCACTGCTG
TATACCGTCT CGAAATTCAC CGACCTCGAG TCGGTCGCAC TCTTCGAGAA AGAACCGGAA
ATCGCGGCGA TCAACTCCCA CCATACGAAC AACTCTCAGA CGCTCCACTT CGGGGACATC
GAGACGAATT ACTCCCTGGA GAAGGCCGAG GAAGTCAAGG AGGGGGCCGA GATGGTCGCT
GGCTATCTCG AAGCCAACGA TTCCGACCGA GAGATGCACG CAAAGCGGAG CAAGATGGCC
CTTGCGGTGG GTGACGAGGA AGTCGACCGT CTCGATGATC GCTATCACGA GAAGGGCTTT
GGCGACCTCT TCCCGAAACT CGACGCGATC GGTCGCGAGG AGATCGCGGA GATCGAACCG
AAAGTCGTCG AAGGCCGCGA GCCCGACACC GACATGCTCG CCCTCCAGAC GCCCGACGGC
TACACGGTTG ATTACGGCGA ACTCGCGACG GACTTCGTCC GCGAAGTCGA GGGCGAGGAA
GGCGTCGATG TCTTCACGGG AACCGAAGTC GAGTCGGTCA ACGAGACCGA CGAGGAGTTC
CTGGTCGAGA CCGAACGTGG CTGGTACCAG AGCGACGCAA CAATCGTCGC CGCTGGCTCC
CACAGTCTCC AGATCGCCAA GGAGATGGGC TATGGCGAAC ACATGTCGCT GCTCCCGGTC
GCCGGGAGTT TCTTTGTCGC CGAGGAGGGG CTGCTCAACG GCAAGGTCTA CACCCTCCAG
ATGGCAAAAC TTCCCTTCGC GGCGGTCCAC GGCGACGCCG AGGTCCACGA CCAGGGACTG
ACACGCTTCG GCCCGACGGC GAAGGTCGTG CCCGCCCTGG AACGCGGGCG GCTCTCGACG
GTCGCCGACT TCTTCGACGT TTTCGAACTC TCGCCGGACT CGTTCCTCAG CTACGCGAAC
ATCCTCGCCG ATCGGACGCT GTTGCCGTAC GTCCTCGAGA ACCTGCTCTA TGACCTGCCG
GCCGTCGGCA AGCGGGCCTT CCTCCCGCAC GTCCAGAAAG TTGTCCCAAC CGTCGAAGCG
AGTGACATCG AGCGCGCGAA GGGGTACGGC GGCGTCCGCC CACAGATCGT CAACACGGAG
ACGAAGTCCC TGGACATGGG CGAGGCCAAG ATCACCGGCG ATGACGTGAT CTTCAACGTC
ACTCCTTCGC CCGGTGCCTC GACGTGTCTG AAGAACGCGA TGCGCGACGC CGAACAGCTG
AGCGAGTGGC TCGACGTCGA CTTCGACGAG GACTCCTTCC GCGAGGCGAC GATCGGGAAC
TTCCCGCGCG GGTCGGCCGA ATAG
|
|---|
| Protein sequence | MQGEYDLIIV GGGISGASLL YTVSKFTDLE SVALFEKEPE IAAINSHHTN NSQTLHFGDI
ETNYSLEKAE EVKEGAEMVA GYLEANDSDR EMHAKRSKMA LAVGDEEVDR LDDRYHEKGF
GDLFPKLDAI GREEIAEIEP KVVEGREPDT DMLALQTPDG YTVDYGELAT DFVREVEGEE
GVDVFTGTEV ESVNETDEEF LVETERGWYQ SDATIVAAGS HSLQIAKEMG YGEHMSLLPV
AGSFFVAEEG LLNGKVYTLQ MAKLPFAAVH GDAEVHDQGL TRFGPTAKVV PALERGRLST
VADFFDVFEL SPDSFLSYAN ILADRTLLPY VLENLLYDLP AVGKRAFLPH VQKVVPTVEA
SDIERAKGYG GVRPQIVNTE TKSLDMGEAK ITGDDVIFNV TPSPGASTCL KNAMRDAEQL
SEWLDVDFDE DSFREATIGN FPRGSAE
|
|---|
| |