Gene Huta_2981 details

Gene Information

• Locus tag: Huta_2981
• ID: 8385290
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halorhabdus utahensis DSM 12940
• Kingdom: Archaea
• Replicon accession: NC_013158
• Strand: +
• Start bp: 3069631
• End bp: 3071478
• Gene Length: 1848 bp
• Protein Length: 615 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 644974059
• Product: hypothetical protein
• Protein accession: YP_003131875
• Protein GI: 257054042
• COG category: [C] Energy production and conversion; [P] Inorganic ion transport and metabolism
• COG ID: [COG1668] ABC-type Na+ efflux pump, permease component

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCGTCTCA AGAAGGTACT CCGGATCGGC TGGTGGGAGG TAACGAAGAA CGCCGGCGGG 
ATCGACCGCC GGACTGCGGC TGTAACGATC GGTGCCATCG TCGTTCTCGG CGCGCTCGCC 
CCGCTGATCG CCAGTCAGGG CGTTGCACTC GATGCCGGCC TGTATCGCGT CGGCGTCGAC 
GAGACGAGCC CCTATTACGG TGTCGTCGAC CGCGATCCGA CGTTTGCCGT CGAGCCCCCG 
ACTCGCGACG GCGTCTCCTC GGGGCAGGTC GAACTGCTGA TCGAGGGATC ATCTGTCGTC 
GACGTTGCCG ACTCCCCGAA AGGAAACGCT GCACTGACCG AGTTGCGAAG TTCGGTACAG 
GCGTATAACG ACTGGCTGAT GGACCAGGAG AAAAACCAGA CTGCCGCCTA TCCGGTTTCG 
GTGACGACTG ACCCCGTCGA TCGTGGGTCG CTTGGGCCGT CAGGAACCGA TGACGGAAGT 
CCCAACGGTG GGACGTCCGA TGGGGGCGAC ACGGGAACGA ACGGCGACAC GGGCGGTGAC 
AGCCCGGGCA CGGGCGGGCC CGGTACTGGT GGTACTACGG GCGATAGCAC GGACAGCGGC 
GGCGGTGGGC TCCCCGGCGG CCTCGGCGGG TTTGCCGGGA GTCTCGGGGG CGGGAGTACG 
ACCGGATCAC CATCGGACCT TGCGCCGCCG TTCCCGTTTG GCTCGCTCGT GCTGGCGTTC 
GTGTTCGTCC TGCCGCTGAA CTTCGTGATC CAGGCCTACG GGAGTTCGAT ACTCAGCGAG 
CGACTCAATC GCCGTGGGGA ACTCATGCTC GTCTCGCCGG TCACGCGAGG TGATATCATC 
GCCGGGAAGA CGCTGCCGTA CTTCCTCGGC GCGATGATTT TCGAAGTACT GCTAACTGCC 
GGTCTGGTCG TGTTTGCTGC AGACGGGGCG AGCGGGTTCG TCTCGATACT GGCAGTGATC 
CCGCTCGTGT TGCTCTTTCT CGGGGCGACG TTCCTCGCGG GAATGTTCGC CCGGTCGTTC 
AAGGAACTCA CGTTCCTGAC GGTCACGATC ACGGTCTCAC TGACGAGTTA CGCGTTCGTC 
CCCGCGATTT TCACCGACGT GACACCGATC GCCCTCATCT CGCCGCTGAC GATCGTCGTC 
CGGGATATCC AGGGCCAGGC GATCGGCCTC GTCGAGTTCG TGTTCTCGAC GCTCCCGCCG 
CTGTTGACGG CGGGTGTCCT CTTCGGACTG GGTGCCGGCC TGTACCGCGA GGAGGACATG 
TTCACCCAGC GGCCGGTTCC GCTGAAAGTC CTCGACTCGC TTTCCGGCCG GATCAAACGG 
CCGACGAGCG CGGCGAAGCT GTCGATCATC CTGTTGCCGT TCATCCTCGT GACCGAACTG 
GTCGCCGTCG CGATGGCCTA TCCGATATGG CTCGGCGCGC CCGAGGTGGC GGTCTTTTTC 
GTGCTGGTCG CTGTCGCCGT CATCGAGGAG ATCGCCAAGA GCATCCACAT CTACGCGGGA 
TTCGTCCACC GGAAGTACGA ACGCACAGTT GCGAGTGCTG TCCTCGTCGG ATCGCTGTCG 
GGACTCGGGT TCTTCCTCGC GGAGAAACTC GGCCTCATCG CGCAGTTGCT CGGCTCCGAT 
CTGCCCGACG TACAGCAGGC AGCCTTGACG ACTGGGGGCG CGGAGTACGG CGTCTCACCG 
CTGCTTGCCC TCGGCCTCCT GCTCGCGCCG TTTGCGCTAC ATGCGGTGAC GGCGACGATC 
TCGGCTCTCG GTGCGGTTCG GAGTCGTCGT GGATACGCCG TCGGACTCGT TCTCGCGATC 
ATGATCCATC TAGCGTACAA CCTCACGGTG GTGAGTTTCC TTGTCTGA 

 

Protein sequence

MRLKKVLRIG WWEVTKNAGG IDRRTAAVTI GAIVVLGALA PLIASQGVAL DAGLYRVGVD 
ETSPYYGVVD RDPTFAVEPP TRDGVSSGQV ELLIEGSSVV DVADSPKGNA ALTELRSSVQ 
AYNDWLMDQE KNQTAAYPVS VTTDPVDRGS LGPSGTDDGS PNGGTSDGGD TGTNGDTGGD 
SPGTGGPGTG GTTGDSTDSG GGGLPGGLGG FAGSLGGGST TGSPSDLAPP FPFGSLVLAF 
VFVLPLNFVI QAYGSSILSE RLNRRGELML VSPVTRGDII AGKTLPYFLG AMIFEVLLTA 
GLVVFAADGA SGFVSILAVI PLVLLFLGAT FLAGMFARSF KELTFLTVTI TVSLTSYAFV 
PAIFTDVTPI ALISPLTIVV RDIQGQAIGL VEFVFSTLPP LLTAGVLFGL GAGLYREEDM 
FTQRPVPLKV LDSLSGRIKR PTSAAKLSII LLPFILVTEL VAVAMAYPIW LGAPEVAVFF 
VLVAVAVIEE IAKSIHIYAG FVHRKYERTV ASAVLVGSLS GLGFFLAEKL GLIAQLLGSD 
LPDVQQAALT TGGAEYGVSP LLALGLLLAP FALHAVTATI SALGAVRSRR GYAVGLVLAI 
MIHLAYNLTV VSFLV