Gene Huta_2980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_2980 
Symbol 
ID8385289 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand
Start bp3068708 
End bp3069628 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content62% 
IMG OID644974058 
ProductABC transporter related 
Protein accessionYP_003131874 
Protein GI257054041 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCGAGG TTCGGGACCT TCGCAAGGAG TACGGCGGCT TTGCCGCCGT TGAGGGGAGT 
ACGTTTTCCG TCGACCGCGG GGAGGTGTTC GGTATCATCG GCCCGAACGG CGCGGGCAAG
ACGACGACGC TGAAGATGCT CGCCGGCCTG ATCGAACCGA CCGCCGGCGA CGTCCAGATC
GCCGGGCTCG CTGCCGACGA TTCAGCGATG CGACGACGCC TGGGGTTTCT CCCCGAGGAA
TCGCCGCTCT ACGAGGAGAT GACGCCCATC TCCTATCTCA CCTTCTTCGC CGACCTCTAC
GATGTACCCG AAAACCAGGC GATCACGCGC ATCCACGACA CGCTCGACAG ACTGGATCTC
CAGCACCGCG ATCGGCCGTT GGGTGACATG TCCAAGGGGA TGAAACGCAA AGTCGCCATC
GCCAGATCGC TGATCAACGA TCCCGACGTG TTGGTCTACG ACGAACCCGC GAGCGGTCTC
GACCCGCTGA CGACGAACTT CATCATCGAC TTCACAACCG AACTCGCCGA GGCGGGTAAG
ACGATCGTCT TCAGTGCGCA CAACCTGTAT CACGTCGAGA GCATCTGTGA TCGCGTCGCG
ATCATGAACC AGGGATCGAT CGTGGCCCGC GGTCCCCTGG AGACCCTTCG AGAAGAACAC
GGTGAGACGA CCTATCACGT CTATACGACG ATCGAACTTC CGGGGAGCGA ACAGCAGAAT
GGCCGATACG TCCGAAGCGT GAATTCGATG GGCGAGGTCG AAGCGACCCG TGAAGACGCC
GCCGAACGCG GGGGCGAGGT CGTCGACATC CGGACCGAAG AGGCGAGTCT CGAAGAAGTA
TTCTTGAACG TCGCCGACGA ACCCGCCCAG GCCGCCGCGA CCGGGACGAC GGGGACGGGG
ACCGTCGATC CGGGTGAGTA A
 
Protein sequence
MIEVRDLRKE YGGFAAVEGS TFSVDRGEVF GIIGPNGAGK TTTLKMLAGL IEPTAGDVQI 
AGLAADDSAM RRRLGFLPEE SPLYEEMTPI SYLTFFADLY DVPENQAITR IHDTLDRLDL
QHRDRPLGDM SKGMKRKVAI ARSLINDPDV LVYDEPASGL DPLTTNFIID FTTELAEAGK
TIVFSAHNLY HVESICDRVA IMNQGSIVAR GPLETLREEH GETTYHVYTT IELPGSEQQN
GRYVRSVNSM GEVEATREDA AERGGEVVDI RTEEASLEEV FLNVADEPAQ AAATGTTGTG
TVDPGE