Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Huta_2980 |
Symbol | |
ID | 8385289 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhabdus utahensis DSM 12940 |
Kingdom | Archaea |
Replicon accession | NC_013158 |
Strand | + |
Start bp | 3068708 |
End bp | 3069628 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644974058 |
Product | ABC transporter related |
Protein accession | YP_003131874 |
Protein GI | 257054041 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATCGAGG TTCGGGACCT TCGCAAGGAG TACGGCGGCT TTGCCGCCGT TGAGGGGAGT ACGTTTTCCG TCGACCGCGG GGAGGTGTTC GGTATCATCG GCCCGAACGG CGCGGGCAAG ACGACGACGC TGAAGATGCT CGCCGGCCTG ATCGAACCGA CCGCCGGCGA CGTCCAGATC GCCGGGCTCG CTGCCGACGA TTCAGCGATG CGACGACGCC TGGGGTTTCT CCCCGAGGAA TCGCCGCTCT ACGAGGAGAT GACGCCCATC TCCTATCTCA CCTTCTTCGC CGACCTCTAC GATGTACCCG AAAACCAGGC GATCACGCGC ATCCACGACA CGCTCGACAG ACTGGATCTC CAGCACCGCG ATCGGCCGTT GGGTGACATG TCCAAGGGGA TGAAACGCAA AGTCGCCATC GCCAGATCGC TGATCAACGA TCCCGACGTG TTGGTCTACG ACGAACCCGC GAGCGGTCTC GACCCGCTGA CGACGAACTT CATCATCGAC TTCACAACCG AACTCGCCGA GGCGGGTAAG ACGATCGTCT TCAGTGCGCA CAACCTGTAT CACGTCGAGA GCATCTGTGA TCGCGTCGCG ATCATGAACC AGGGATCGAT CGTGGCCCGC GGTCCCCTGG AGACCCTTCG AGAAGAACAC GGTGAGACGA CCTATCACGT CTATACGACG ATCGAACTTC CGGGGAGCGA ACAGCAGAAT GGCCGATACG TCCGAAGCGT GAATTCGATG GGCGAGGTCG AAGCGACCCG TGAAGACGCC GCCGAACGCG GGGGCGAGGT CGTCGACATC CGGACCGAAG AGGCGAGTCT CGAAGAAGTA TTCTTGAACG TCGCCGACGA ACCCGCCCAG GCCGCCGCGA CCGGGACGAC GGGGACGGGG ACCGTCGATC CGGGTGAGTA A
|
Protein sequence | MIEVRDLRKE YGGFAAVEGS TFSVDRGEVF GIIGPNGAGK TTTLKMLAGL IEPTAGDVQI AGLAADDSAM RRRLGFLPEE SPLYEEMTPI SYLTFFADLY DVPENQAITR IHDTLDRLDL QHRDRPLGDM SKGMKRKVAI ARSLINDPDV LVYDEPASGL DPLTTNFIID FTTELAEAGK TIVFSAHNLY HVESICDRVA IMNQGSIVAR GPLETLREEH GETTYHVYTT IELPGSEQQN GRYVRSVNSM GEVEATREDA AERGGEVVDI RTEEASLEEV FLNVADEPAQ AAATGTTGTG TVDPGE
|
| |