Gene Huta_2966 details

Gene Information

• Locus tag: Huta_2966
• ID: 8385275
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halorhabdus utahensis DSM 12940
• Kingdom: Archaea
• Replicon accession: NC_013158
• Strand: +
• Start bp: 3054166
• End bp: 3056067
• Gene Length: 1902 bp
• Protein Length: 633 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 644974044
• Product: copper-binding protein
• Protein accession: YP_003131860
• Protein GI: 257054027
• COG category: [P] Inorganic ion transport and metabolism
• COG ID: [COG3420] Nitrous oxidase accessory protein

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.58958
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGAGTCA CGCTCGTTCT GGCCGGTCTC GCTGTCGTGC TCGCGGGGGC CAGCCTGGCG 
TTCGCCGCTG ATCCGGGCGC GAGCGCGAGT GCAGAGCCGG TTCCGTTCTC CGATACCCTC 
ACGACCGGGC TTGCGGGTGT CGATGTCCAG CAAGCCTACG CCGCCGGCCA CGAGATCCCC 
CGCGTCGAAG TGTTCTACTC GCACTATCAG TACGTCGTGG GCTACTATGG GGTAGCGTCT 
GCGGTCACGG CAGTCGATCG CGAGGAGACG ACCCGGCAGT TCGGTCGCCC CATCGGGATA 
TACGTGAGCG ACTACTCCGG TGCCGGCCCT CGGCTCACTG ACGAGGGTTA TCTCACCGTC 
ACGTCCGATC CCGCAGTCGG GTGGACGCGA GCCAGCGAGG CTTCGTTCGT CGTCGGAAGC 
GGCGCACGGA CCCCTGGCAG TCCGGCGGTT GTCCCGTTCA GTGACGCGGC TGACGCGAGC 
GACTTCGCCG AGCGCTACGG AGGAGCCGTC CGCGAGTGGG GGGCGCTCGA GCCCCGCGAA 
GACGAACCGA GGGCATCGTG GCTACGTGAG GCGGCGAGCG ATCGCAAAGC GTGGGCCGAC 
CGGACCGTGC AGGATCGTCG ACCCCTCCTG GATCGGCCGG TCTCGATCAC GGTGGGTGGC 
GACGTTCCGA CGCTCGCCGC GGCGATCGAG GCCGCACCGC CGAACACCAC CGTTCGACTC 
CCGCCCGGAA CCTACGACGG AAACGTCACC ATCGGGAAGC CGCTCACGGT CCAGGGAGCA 
GGCGAACGGA CGCACGTCGT CGGTGATAAC GGAACCGTGC TTCGAGTGAC CGCGCCGCGG 
GTCGGTCTCG CCGATCTGTC GATCAGTGGC GTGGGTAAGT CGAACACGGG CACGCCGGCC 
AACGCCTCCG AAACAGCCGA CGACTGGGAC GAGAGCATCC GGACAACCTA CGGGTATGGC 
GATGCCGGGG TCGTCTTCGA CGGGGCGAAC CGATCGCTGG TGTCCCGGGT CACCATTCAG 
ACACCAGCGA GCGGCGCGAT CGTCCGAGAC AGCGATGGCG TCGTCGTCGA GAACCTCTCG 
ATCGACGGTA CCGCCGACTG GCAGGACGGA TTCATGGGCG TCCTTGCGAT GGACTCCCGG 
ATCGTGGTTC AGCACAGCAC GTTCACCGGC GGCCGGGACG CGGTCTACAC CCACCACGCC 
GATGGACTCG TGGTGCGGGA TAACCGAATG ACTGGCATGC GATTTGCGGT CCACGAGATG 
TACACATCCG AGACACTGGT GGCGAACAAC ACCGCCCGCG ATACCGATAT CGGGATCGTC 
GTCATGACGC GGCCGCGATC GAACGTGATC ATCGAAAACC GGGTTTCCGC GAGCGACGTC 
GGGATCTCAG TCGGCGGGAG TAGCTCACTC GCGGCCAACA ACACGCTCGT CGCCAACCGC 
TACGGGATGG ACCTCGGTGC CCAGCGATCG ACCTTCGCGC ACAACGTCCT GGTCGGCAAC 
GAGGTCGGAC TGCGAACGGG CACGATCGTT CCGACAAACC GCGTGACGGA CAACGACCTC 
GTGGACAACG ACCGCTACGT CGACACCGGA CGTGGGCCGG TCCGGGTGTG GACGGGCAAT 
CACTGGGGCA CCCTCCCGGG CCGCGATACC GATGCCGACG GTCGGATCGA TCGCGCGTTC 
CGCCCGACTG GACCGGTCGA TAGCGTCGTC GGGCGCTCCG ACGGGGCCGC AACGCTCGCG 
ACGTCGCCCG CCGTCACCAT GTTACGGCAG TTCCAGGCGG CGGTTCCGGG ATTGCGATCC 
GCGAACGTGA TCGACGACGA GCCGCGGACC GATCCGGTCC ATCCCGACCG GGTCGCGGCG 
GCACAGAATG CTACCGCCGC TGGTGCGGGG GTTTCGCCAT GA 

 

Protein sequence

MRVTLVLAGL AVVLAGASLA FAADPGASAS AEPVPFSDTL TTGLAGVDVQ QAYAAGHEIP 
RVEVFYSHYQ YVVGYYGVAS AVTAVDREET TRQFGRPIGI YVSDYSGAGP RLTDEGYLTV 
TSDPAVGWTR ASEASFVVGS GARTPGSPAV VPFSDAADAS DFAERYGGAV REWGALEPRE 
DEPRASWLRE AASDRKAWAD RTVQDRRPLL DRPVSITVGG DVPTLAAAIE AAPPNTTVRL 
PPGTYDGNVT IGKPLTVQGA GERTHVVGDN GTVLRVTAPR VGLADLSISG VGKSNTGTPA 
NASETADDWD ESIRTTYGYG DAGVVFDGAN RSLVSRVTIQ TPASGAIVRD SDGVVVENLS 
IDGTADWQDG FMGVLAMDSR IVVQHSTFTG GRDAVYTHHA DGLVVRDNRM TGMRFAVHEM 
YTSETLVANN TARDTDIGIV VMTRPRSNVI IENRVSASDV GISVGGSSSL AANNTLVANR 
YGMDLGAQRS TFAHNVLVGN EVGLRTGTIV PTNRVTDNDL VDNDRYVDTG RGPVRVWTGN 
HWGTLPGRDT DADGRIDRAF RPTGPVDSVV GRSDGAATLA TSPAVTMLRQ FQAAVPGLRS 
ANVIDDEPRT DPVHPDRVAA AQNATAAGAG VSP