Gene Huta_2961 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_2961 
Symbol 
ID8385270 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand- 
Start bp3050807 
End bp3051469 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content66% 
IMG OID644974039 
Productprotein of unknown function DUF420 
Protein accessionYP_003131855 
Protein GI257054022 
COG category[S] Function unknown 
COG ID[COG2322] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.675785 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGACAG ATTCAGGCTC CTGGCTCCGA CGAGTAGCTC GGGAGCGGCC CCTCGGCGTG 
ACAGCCGTCC TTTCGGCGAT CGGGTACGCC CTCGTGGCGG GCGCGTTCGC GGGGGCGATC 
CCGCTGTTTC CGCCGCTCGA CCGGTCGACA GTCAACCTCT TTGGTCACCT CATCGCCGTC 
GTCAACGCGA GCGCGCTGAG CGCGATCCTC GCCGGCGTCT ACTTCATCAA GCACGACGAA 
GTCGAAAAAC ACCGCGCGGC GATGCTGACG GCGTTCGCCC TCATCGCCGT CTTCCTGGTG 
CTCTATCTCT GGAAGGTCGG CGGCGGCTTC GAGAAGTCGA TCACCGTCAC CGGCCCCCCG 
GAGATCGCCT ACCTGCTGAT GCTGGCCGTC CACATCATCC TCTCGGTGGT GGCGGTCCCG 
GTCGTCCTCT ATGCGGTGAT TCTCGGACTC ACGCACACGC CGGCCGAACT CCGATCGACG 
GCCCACGCCC GGGTCGGCCG GATCGCCGTC GCCGCCTGGT CGATCAGTCT CTTTCTCGGG 
ATCGTGACCT ACGTCATGCT GAACCACGTC TACGGCTGGG TGCCCCGCGA ATCAATGCTC 
CTGCTGGTTG CCGTGCCACG GCCGGTATGG GATCTGGGCG GGGAATCCGG CGGTCGCGAA 
TAG
 
Protein sequence
MQTDSGSWLR RVARERPLGV TAVLSAIGYA LVAGAFAGAI PLFPPLDRST VNLFGHLIAV 
VNASALSAIL AGVYFIKHDE VEKHRAAMLT AFALIAVFLV LYLWKVGGGF EKSITVTGPP 
EIAYLLMLAV HIILSVVAVP VVLYAVILGL THTPAELRST AHARVGRIAV AAWSISLFLG 
IVTYVMLNHV YGWVPRESML LLVAVPRPVW DLGGESGGRE