| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_2949 |
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| Symbol | |
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| ID | 8385258 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhabdus utahensis DSM 12940 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013158 |
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| Strand | + |
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| Start bp | 3037424 |
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| End bp | 3039136 |
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| Gene Length | 1713 bp |
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| Protein Length | 570 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644974027 |
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| Product | protein of unknown function DUF181 |
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| Protein accession | YP_003131843 |
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| Protein GI | 257054010 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1944] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00702] uncharacterized domain
[TIGR03604] bacteriocin biosynthesis docking scaffold, SagD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.108847 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGTTG GTCTCGTGGG TGCCGGTCCA GCCGCAGACG CGGTCGAATC GGCGCTCTCG
GACGTCGAGG GCGCTGTGGA GACGGCGGCC CCCGACGAAA TCGACGAGTA CGAACTGGCT
ATCGTGATCG AGGTCGCCGG TGCAAACGCC TTCGAGCAGG CAAACCAGCG GGCGATCCAG
ACAGGCACGT CCTGGATCGC GATCGAACTC GGCGGCGTTG GCGGCGTCCC GGTCGTCGAT
GCCGCGATCA CTGGCTTCGG CCCCGAAACG GCCTGCTACG AGTGTCTTCG CAAGCGGGTC
AGGGCGAACG TCGATCCGAC CGAGGAGCCG ACGAAAGCGC CACCGCCAAC CACGGCACGG
TTCGCCGGTG CGGTCGCCGG GCGGGCGGCC GCCAGTACAC TGGATCGGTC GGTCGACGGT
CCCGAGGTGG TCGGATTCGT GAGGGAGATT CCGGACGCGA CCCGGCGATT GTTGTCCGTC
CCTCACTGTG AGTGCGGTTC GGAACCGTCC CGTACTATCG ACCGGACGAC GGCCGACCGA
GATCTGGAAG CCACCATCGG CCGGGCCGAA CAGGGACTCG ACGACCGGGT CGGGATCGTC
CAGGAGGTCG GCGAGATCGA ATCCTTCCCC GCGCCCTACT ATCTCGCACG AAACGGCGAC
ACTGAGGGGT TCAGCGACGT GTCATCGACC GGTCCGGCCG CGGGTGTCGA CGTCGACTGG
AACGGCGCGC TGATGAAGGC ACTGGGGGAG GCCTACGAAC GGTACAGTGC GGGCGTCTAT
CGAACGGATC GGCTACAGAC AGCGTCGGTC GAGGAGCTGG ACAATCCGAT CGCGCCGTCC
GCGTTCGTGA CCCCCGAGCC ACCCGAATCG GACTCCATCG AGTGGATCGA GGGCGAGAAT
CTGGCGACGA GCCAGTCAGT ACAGGTGCCG GCGTCCGTGG CGATGTATCC TCCCGCCGGG
GATCGGTTCC GACCCGCGAA CACGACCGGG CTCGGGTTCG GTAACGCGAC AGTCGAGGCG
TTGCTGTCGG GACTCTACGA GGTGATCGAG CGGGACGCGG CGATGCTCTC GTGGTATTCG
ACGTTCGAGC CCCTGGCACT CGACGTCGGC GACGGGGCCT TCGAGACGCT TGCCCGGCGG
GTGCGGACTG AGGGACTGTC GGTCACGCCG CTCCTTCTCA CACAGGACGT CGACGTTCCG
GTCGTGGCTG TCGCTGTCCA CCGGGCGGAC GGCGACTGGC CCCGGTTCGC CCTGGGTTCG
GGAGCACATC TTGATCCGGC TGCCGCCGCC CGATCGGCAC TAGCGGAGGC CGTCCAGAAC
TGGTTCGAAC TCCGGCAGAT GGGGCCGGAC GGCGCAGCCG ATGCCGGCGG GGCGATCGGC
GAGTACGCGG CCTTCCCCGA TATCGTCGCC GACTTCGTCG ACGCCGCAGG GACCGTCTCG
GCCGACGCTG TCGCGCCCGA CGAGCCACTT GCGGGTTCCG AGGCCCTGTC GACTGTGGTC
GATCGAGTCA CCGCGGCCGG GCTCTCGCCG TACGCCGTCC GGCTCACGCC GCGGGACGTC
GAGGCGATGG GATTCGAGGC CGTTCGCGTG CTCGTCCCAT CGGCCCAGCC GCTGTTCCTC
GGGGAGCCGT ACTTTGGCGA CCGACTGGAG ACGGTCTCGG ACCGCCTCGG CTTCGAGGCG
CGACCTGACC GACCGTTCCA TCCGTTCCCC TGA
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| Protein sequence | MTVGLVGAGP AADAVESALS DVEGAVETAA PDEIDEYELA IVIEVAGANA FEQANQRAIQ
TGTSWIAIEL GGVGGVPVVD AAITGFGPET ACYECLRKRV RANVDPTEEP TKAPPPTTAR
FAGAVAGRAA ASTLDRSVDG PEVVGFVREI PDATRRLLSV PHCECGSEPS RTIDRTTADR
DLEATIGRAE QGLDDRVGIV QEVGEIESFP APYYLARNGD TEGFSDVSST GPAAGVDVDW
NGALMKALGE AYERYSAGVY RTDRLQTASV EELDNPIAPS AFVTPEPPES DSIEWIEGEN
LATSQSVQVP ASVAMYPPAG DRFRPANTTG LGFGNATVEA LLSGLYEVIE RDAAMLSWYS
TFEPLALDVG DGAFETLARR VRTEGLSVTP LLLTQDVDVP VVAVAVHRAD GDWPRFALGS
GAHLDPAAAA RSALAEAVQN WFELRQMGPD GAADAGGAIG EYAAFPDIVA DFVDAAGTVS
ADAVAPDEPL AGSEALSTVV DRVTAAGLSP YAVRLTPRDV EAMGFEAVRV LVPSAQPLFL
GEPYFGDRLE TVSDRLGFEA RPDRPFHPFP
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