Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Huta_2946 |
Symbol | |
ID | 8385255 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhabdus utahensis DSM 12940 |
Kingdom | Archaea |
Replicon accession | NC_013158 |
Strand | - |
Start bp | 3032518 |
End bp | 3035010 |
Gene Length | 2493 bp |
Protein Length | 830 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644974024 |
Product | hypothetical protein |
Protein accession | YP_003131840 |
Protein GI | 257054007 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGTGGACC TAACCCGCCG GCGACTGCTC GCCGGCGTCA CCACGACCGC CCTGGCCGGC TGTATGGACG CCGCCGAGCC CTCCGAAGCC CCTCCCGCAT CGACACCCGA CGAGACCGAT TCGCAAACCT CGACGGATGA ACCGACACCG ACAGCGACCG ACACGCCGAC GCCCGAGGCG GACGAGATTT CCCTGCCCGA GGATCTGGTT GCGGTGCTTG ATCCGCTCCC GGAATCAGTC GACGGCACGT CGGTGTCTCG GATCCGGAGC ACTGCCCCAT CCCCGGACAA CGACGAAAGC TTCAATCGGT TGCCGGCGTT CGGATCAGTG TCACAGATCG GTCTCGAACT GGACGAGATC GATCGTGCCG CGGCTGCCAG ATACGGCGAC TATCAGACAC AGATCGTCAC GATGGTCGGT TCGTTCGACG CCGAAAAGCC GACGCTGCCC GAAGATGTCC CGATCGAACA GCTCCATCGC GAGGACGGCC GTTTGATCGT GGCGATGGAC GACACCAAAG ACGGCTGGAA GAACGGGGTA ACGGCGGCGA CCGAGGCGGC TGACGACGGC GAGCTTCCGC TGTCCGAGGA CGCCCGACTC GCGTTATCAC AGGTCAGCGA GTCAGCCGTC ATCCAGTTGC TGCCATCGAT CCCTGCGGAC GAGACTGGGC AGCTCGACGG GGTCAACACC GACGTGATCG AGGCCTTCGC CTTCGGTGGG GATCGGCTCG ATCCGATGAC GGCACGCATC TCGATCACGG TCGTCTACAC CGAGCAATCG GACTTCGACA CCGGGGAATT CAGGACGCTC GCCAAAAACG TCGGCACGGG CAACACTGAC GACATGACGG TCGAGCGCGA CGGCCGCGTC GGTATCGGAA CGCTCACCGT GCAGGCTCCG TCCCAGGAGA TTCGCGAACG ATCTCCGGAT CCGAGCCTCA GTGTCGAGTA CGACCAGGAG GCTGGGTCGG CTGAAATCCA CAACTTTGGC GAGGAACCAC TCGAAACGGA GTCGTTGACG CTGTCCGTCG ACGACGAACC GGTCGAGAAC GCCTGGAACG GCGAGCCGAT GCAGCCGGGG AGTTCGATCG CAGTCGACGC CGACCCGCTC TCGGTGGTCA TGGTCGAGTG GACCGATCCA CAGAACGCCG AGTACGAACA GATAGTCTTC CACGAGGTGC TCTCCAGGGG CGTCACCTTC GAGAACGAAT ACGACATCGA ATCGAAAACA CTGACGATGA CCTACACCGG TTCCGAGCCG ATCGAGCGAA CCGATCGCGT CGAGATCAAT CACTGGGAGG GCGCGGAAGA CAGGTTCGGA AGCGGCGAGG AGACGACCGA ACCGCTGGCA GACCGGTACG AACAGCTGAC CAGGGGCGAC GAGATCACGA TCGAGGGCGT CACATTCGGT GATCGAGTGA CATTGATGGC TACGTACTCC TATGAGCGAG GGAGCACCAG CGGATCGATG TCGTCGAGCG TCCATACCTT CCGTGCACGC ATTCCGGGTC GGTTCCGACT CGAAAGCGGT GAGACGCCGA CGCTGACCTA TTACGGGCGA GAAACTCGCG ACCCGGCGAA CTTCCGGGTG ACTGTCGACG GCGAGGAACT CTCGAATGGG TTTACCGAGA AATACGATAC CCTCGAACCG GAGGACACGC TGGAGATCAA GGCCGAACCG AGCGAGGAAG TCGTCGTCGA GTGGGTCGGC GAGGGCGGGC CGGCGGAAGC GCTCAGCGAA TACGTCGAAC CGCCGGCGTC CTTCGAGTTA AGACGCACCA CGAACGGGTT CGAAATCGTC TACGGTGGCG AGGAGCCCTA CGACGCCGAC GCCTTTGCCA TTCGGACCGG CGACGGCGAG TTCGATCCGA TCTTCGCCGC GGAATACGAC ACCCTCGAAA AGGGCGACAG TGTGGCAGTC GAACTCGATC AGCTGGGGAC GATCAACCTC TACTGGATGG AACCGGACGA GCCGACTACC TACACCTGGC TCCACGTGCG CGATATGCTC CAGTTCGAAC TCGATGGCTC CTCGCTGGTG TTTACGGGGC GGGGCAAATG GCCCGCCGAG GAGGTCAGTG TTACCGTCGA CGACGAATCG ATTTCAGGTT TCACAGGAAC GATCACGAAC GGCGACAGCA TCGACTTGAG CGCTGAAACC GGGTCAACTG TCGGAGTCCA GTGGACCGGA GCCGATAATC CGACAACAGT GTTCTCGGAG ACGATCCATC CGCCGCTTGA GTTCACCTTC GAATACGACG AGGGGGATGA ATCGCTGACG ATCACCTCGA ACACTGCGGC GAAACTCGAT CCCAGCAAAC TCGTTGTCGT CGTCCTTCGC GATGAGGACA GACCGGAGTA TCCCGACGCC TGGGCCGATG CGTACGACGT CGTCGAAAGC GGTGATTCGA TCACCCTGTC AGTGTCCGCT ATCGAAGGGG TAGCGGTCGA ACACGAGTCC TGGAACGTCT ACGTCCACGA AGACCTGGAA TGA
|
Protein sequence | MVDLTRRRLL AGVTTTALAG CMDAAEPSEA PPASTPDETD SQTSTDEPTP TATDTPTPEA DEISLPEDLV AVLDPLPESV DGTSVSRIRS TAPSPDNDES FNRLPAFGSV SQIGLELDEI DRAAAARYGD YQTQIVTMVG SFDAEKPTLP EDVPIEQLHR EDGRLIVAMD DTKDGWKNGV TAATEAADDG ELPLSEDARL ALSQVSESAV IQLLPSIPAD ETGQLDGVNT DVIEAFAFGG DRLDPMTARI SITVVYTEQS DFDTGEFRTL AKNVGTGNTD DMTVERDGRV GIGTLTVQAP SQEIRERSPD PSLSVEYDQE AGSAEIHNFG EEPLETESLT LSVDDEPVEN AWNGEPMQPG SSIAVDADPL SVVMVEWTDP QNAEYEQIVF HEVLSRGVTF ENEYDIESKT LTMTYTGSEP IERTDRVEIN HWEGAEDRFG SGEETTEPLA DRYEQLTRGD EITIEGVTFG DRVTLMATYS YERGSTSGSM SSSVHTFRAR IPGRFRLESG ETPTLTYYGR ETRDPANFRV TVDGEELSNG FTEKYDTLEP EDTLEIKAEP SEEVVVEWVG EGGPAEALSE YVEPPASFEL RRTTNGFEIV YGGEEPYDAD AFAIRTGDGE FDPIFAAEYD TLEKGDSVAV ELDQLGTINL YWMEPDEPTT YTWLHVRDML QFELDGSSLV FTGRGKWPAE EVSVTVDDES ISGFTGTITN GDSIDLSAET GSTVGVQWTG ADNPTTVFSE TIHPPLEFTF EYDEGDESLT ITSNTAAKLD PSKLVVVVLR DEDRPEYPDA WADAYDVVES GDSITLSVSA IEGVAVEHES WNVYVHEDLE
|
| |