| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_2899 |
|---|
| Symbol | |
|---|
| ID | 8385208 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhabdus utahensis DSM 12940 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013158 |
|---|
| Strand | + |
|---|
| Start bp | 2980348 |
|---|
| End bp | 2981127 |
|---|
| Gene Length | 780 bp |
|---|
| Protein Length | 259 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 644973977 |
|---|
| Product | protein of unknown function DUF62 |
|---|
| Protein accession | YP_003131793 |
|---|
| Protein GI | 257053960 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1912] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0750848 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTACGC TCAGCTCGGA CTTCGGGACG CCGTATCCAG CAGCGATGAA GGGCGTCCTC
GCATCCGGAA CTGATGCCCG TTTGATCGAC GTCTCCCACG AATTCCCTCG CCAGGACGTC
CGGGCGGCCG CATTCTGGCT CCGTGAAGTG CTGCCACACT TCCCGCCGGC GGTTCACCTC
GTCGTGGTCG ATCCCGGCGT CGGCACAGAC CGTGCGGCCC TGGCGATCCG CGCCGGTGAG
CACGTCCTCG TCGGCCCCGA CAACGGTGTC CTGCTTCCGG CCGCCCGTAA ACTCGCTGAC
GCGGCCGACT CCGAAGCCGA TGCGATCGAG GGGTTCGAAT ACGCATACGA CGATCCCGAA
AGCGTCACCT TTCACGGTCG TGACGTGTTC GCACCGGCGG CGGCGACGAT CCACGAGGCG
GGCCGGTCCC AGTTCGAAGC CGGCGATCGA TTCGGGCCCG TCGAAGCATA CGAGGGCCTG
ACGTTCCCCG ACCCCACGAT CCGCGAGGAC GGTGCCGACG GCGAAGTCCT GGTCGTCGAT
GACTTCGGCA ACGCGATCAC GAACGTTCCG GGCGAGATTC TCACTGAACG CTTCGGCGAG
GCCGTGACCG TCAACGGCGT CTGGGCACCG GCCAAGCGGA CGTATGCCAT GGTCGAAGCC
GACAACCGAC TCGTCACTGT CGGCAGTCAC GGCAACGTCG AACTCGCCGT CAACCAGGGG
CGTGGCGACG AACGGTTCAG CGTCTCGACA GGGTCGCGGA TTCGGTTGCG ATGGACGTGA
|
|---|
| Protein sequence | MITLSSDFGT PYPAAMKGVL ASGTDARLID VSHEFPRQDV RAAAFWLREV LPHFPPAVHL
VVVDPGVGTD RAALAIRAGE HVLVGPDNGV LLPAARKLAD AADSEADAIE GFEYAYDDPE
SVTFHGRDVF APAAATIHEA GRSQFEAGDR FGPVEAYEGL TFPDPTIRED GADGEVLVVD
DFGNAITNVP GEILTERFGE AVTVNGVWAP AKRTYAMVEA DNRLVTVGSH GNVELAVNQG
RGDERFSVST GSRIRLRWT
|
|---|
| |