Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Huta_2881 |
Symbol | |
ID | 8385190 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhabdus utahensis DSM 12940 |
Kingdom | Archaea |
Replicon accession | NC_013158 |
Strand | - |
Start bp | 2962490 |
End bp | 2964202 |
Gene Length | 1713 bp |
Protein Length | 570 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644973959 |
Product | PAS/PAC sensor signal transduction histidine kinase |
Protein accession | YP_003131775 |
Protein GI | 257053942 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5002] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATGCCT GGTTGCTGGT GTATCAGGTG GGACTCGTCG TCGCGATCGC GGTGTCGATC GTGGCGGCCG GGCTCGCGTG GCGCCATCGC GACGAGCGTG GCGGGACACC ACTCACGGCC GTCCTCGTGG CTGAGATCGG CTGGGCCGTG GCGATCCTGG TCACGACGGT CGTTCCGGGG ACGGACATCG CACTCGCTGC CAACAAGGCA CTCCTGGCTG GCGTTGTCGT CCTCGTGCCC GCGCTCCTGG TGTTTGCTCT GGAGTACACC GGCCGCGAGT CGCTGGTCAC CCGCCGGCTT CTCGCCGCGT TGTCGGTCGA ACCGATCGTC TTCACGGCGC TGGTCTGGAC GAACGGAGCC CACAGGCTGG TGTGGGAAAC GCTGCGTGCC GACGGGACGG GACCGCGCGG TCTCGAAACC GTCAACGGGC CACTGTTCGG CGTCCACACC GCCTATTCGT ATCTTTTGCT TTCGGTCGCC GTGTTGTTGA TCGTCGTTTT CGCGCTCCGG TCCCGGTATT TCTACCAGCG ACAGGTCATG GCTATCGTGG TCGCGACGCT GGTTCCCTGG GGAGCCAACG CCGTGTCGCT GGCGCTCGGG CTGGAATACG ACCTCACACC CATCGCCTTC ACTGTCACCG GGGTCGCGTT CACCTGGGCA GTCGTCCGCG AGGAGTTCCT CGATATCACG CCCATCGCAA CCGAGGTGGT CTTCGACCGC ATCGACACGG CCGTCGTCGT CGTGGACGCG TCGGACCGCA TCGTCGACAT CAACGAGAGC GCTCGAACGT TACTCGGCAT CGACGACGAC GCCGTCGGCA CGCGGATCCA GACGCAGCTC ACATCCGTTC CAGACGCCGT CCCAGTCTAC GAATCGGTCA CTGACGGTCA CGACACCGGG ACGCGTGACC TCTCCATCGG CGAGCGCTCT ATCAGGATCG AGGGCTCGCC GCTGGTCGAC CGCCGTGGGG ATGTCGTCGG TCACGCACTC ATCATGGTCG ATCTGACCGA GGAGCGCGCT CGCGAGGCCG AACTAACCCG GCGAAACGAA CAGCTCGATC GGTTCGTCGG CGTCGTCTCC CACGATCTGC GGAACCCATT ACAGGTAGCG GCTGGCCGGC TCGAACACGC GCGCCGAGAC GGCGACGAGG AACACTTCGA GGCGGTCGAG CGCGCTCACG ACAGGATGGA ACGACTCATC GAGGATCTGC TCGCGCTCGC CCGCCAGGAC GAAGATCTCG ACCGCGAGCG GATCGAACTG GGGACAGTCG CGGAGTCAGC GTGGTCCTAC GTCGAGATTG CTGACGGGAC GCTCGAACTC GCTGTGGATG ACTTCACGGT TGTGGCCGAC CCGGATCGAT TGAGCCAGTT GTTCGAGAAC CTCTTTCGGA ACGCCGTGGA ACATGGTTCC ACGAGCCCTG ACTCGCAGGC TCGTCAGGAC GCCGTCGAAC ATGGGGGCGA AGGTGTGACC GTCACCGTCG AGTGCCTCCC CGACCGCCGG GGGTTCGCAG TCACGGATGA TGGCCCGGGA TTCGGTGACG CGGACACCGA GAAGGTGTTT GCGGACGGCT ACACGACGAC CCGAGACGGG ACCGGGTTCG GCCTCTCCAT CGTCGCGGAG ATCGCCACCC AGCACGGCTG GTCGGTTTCG GCCACCAACG CGGAGGGGGG CGGCGCGCGG ATCGAAGTTG TAACCGACGG GGAACCGGCG TAG
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Protein sequence | MDAWLLVYQV GLVVAIAVSI VAAGLAWRHR DERGGTPLTA VLVAEIGWAV AILVTTVVPG TDIALAANKA LLAGVVVLVP ALLVFALEYT GRESLVTRRL LAALSVEPIV FTALVWTNGA HRLVWETLRA DGTGPRGLET VNGPLFGVHT AYSYLLLSVA VLLIVVFALR SRYFYQRQVM AIVVATLVPW GANAVSLALG LEYDLTPIAF TVTGVAFTWA VVREEFLDIT PIATEVVFDR IDTAVVVVDA SDRIVDINES ARTLLGIDDD AVGTRIQTQL TSVPDAVPVY ESVTDGHDTG TRDLSIGERS IRIEGSPLVD RRGDVVGHAL IMVDLTEERA REAELTRRNE QLDRFVGVVS HDLRNPLQVA AGRLEHARRD GDEEHFEAVE RAHDRMERLI EDLLALARQD EDLDRERIEL GTVAESAWSY VEIADGTLEL AVDDFTVVAD PDRLSQLFEN LFRNAVEHGS TSPDSQARQD AVEHGGEGVT VTVECLPDRR GFAVTDDGPG FGDADTEKVF ADGYTTTRDG TGFGLSIVAE IATQHGWSVS ATNAEGGGAR IEVVTDGEPA
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