Gene Huta_2880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_2880 
Symbol 
ID8385189 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand+ 
Start bp2961769 
End bp2962380 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content64% 
IMG OID644973958 
ProductSuperoxide dismutase 
Protein accessionYP_003131774 
Protein GI257053941 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0605] Superoxide dismutase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGAAC ACTCAAACCC CGAACTGCCG TCCTTGCCGT ACGACTACGA CGCCCTCGAG 
CCGCACATCT CCGAGCAGGT CCTGGAGTGG CATCACGACA CCCATCACCA GGGCTACGTG 
AACGGGCTTG GTGCAGCCGA GGAGACGCTC GCGGAGAACC GCGCGTCGGG CGACCACGGA 
ACGACCGGTG GTGCCCTAGG CAATGTCACC CACAACGGGT CCGGCCACTA TCTGCACACG 
CTGTTCTGGG AGAACATGTC CCCGAACGGC GGTGGCAAGC CTGAGGGCGC TCTCCTGGAA 
CGCATCGAGG AAGACTTCGG CTCCTACGAC GCCTGGAAGG CCGAGTTCGA GGCCGCCGCG 
GGTGCCGCCG GTGGCTGGGC GCTGCTGGTC TATGACCCTG TCGCCAAGCA ACTCCGGAAC 
GTCGCGGTCG ACAAACACGA CAACGGCGCG CTGTGGGGTA GCCACCCGAT TCTGGCCCTG 
GACGTCTGGG AACACTCCTA CTACTACGAC TACGGGCCGG ATCGCGGCAG CTTCATCGAC 
GCCTTCTTCG AGGTCGTCAA CTGGGAGACG GTCGCCGACG AGTATCAGAA GTGCCTCGAC 
CACTTCGAGT AA
 
Protein sequence
MSEHSNPELP SLPYDYDALE PHISEQVLEW HHDTHHQGYV NGLGAAEETL AENRASGDHG 
TTGGALGNVT HNGSGHYLHT LFWENMSPNG GGKPEGALLE RIEEDFGSYD AWKAEFEAAA 
GAAGGWALLV YDPVAKQLRN VAVDKHDNGA LWGSHPILAL DVWEHSYYYD YGPDRGSFID 
AFFEVVNWET VADEYQKCLD HFE