Gene Huta_2872 details

Gene Information

• Locus tag: Huta_2872
• ID: 8385181
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halorhabdus utahensis DSM 12940
• Kingdom: Archaea
• Replicon accession: NC_013158
• Strand: -
• Start bp: 2951725
• End bp: 2953827
• Gene Length: 2103 bp
• Protein Length: 700 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 644973950
• Product: hypothetical protein
• Protein accession: YP_003131766
• Protein GI: 257053933

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.192718
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCCGCTG TGAAAGTCGA GACCAGTCCC GGGAAGCCAT CACGCCTAAA TTATCAGCAG 
TGTATTTTTG TCGAAATCGA ATTTGAGACC GCTACAATCA CCGAAATATA TTTCTTGGCG 
ACTATCGTAA TTGATATAGT GAGTTCCAAA ATGGGGCTTT CCTCGGACGG TTCGGGAGAG 
TCCCGGGGGC TGTCGAGCGT GATGGGGTTT GCCCTCGTTT TTGGCATGGT CATTGCGGGG 
TCGATGGTCA TCGTCAGCGT CGGGGCAGTC TCTCTCAGTG AGTCCCAGTC TGTGGTTTCG 
ATGGAGAGTG CCGTGACAGC GATGAATGAC GTCGACGCGA CGATATCGTC TATTCGGGGC 
CACTCCGGGA GTCAGGCATC TATCAAACTT CCGGACGATG GGGAATACGT CAACTCCGGC 
TGGATACAGA TCGAAATCAC GGATTCGTCG GGTACCGTCC AAAATCAGAC GGGGAAGATC 
ACGCTTGGAA AATATGCGTA CGAACGTGAC GGCCAGGAAG TTGCGTACCA GGGCGGCGGT 
GTCTGGCGGG GCGACGGCGA GAACTTCGTA ATGGTGTCGC CACCTGACTT CGAGTATGCG 
GGTGGCCCGA ATCCCACGCT TTCGTTTCCG ATTACGTCCC TGGAAGGGGT GAACGCGACG 
GGGAGATCAT ACAGCATCGC TGCCAACCGA TCCAACAATA TTTCGGCAGA TACGCTACCC 
AGAGGTCCGA TAGATCCAGG AAATGAGGTT CAGATTACGG TTCATAGCAA GTATGCAGAC 
GGATGGGCGA GGTACTTAAA CAAAAGAGCG GACGGTGACG TAACCAAAAC TGGTTCAAAA 
ACAGTCAAAT TGACGCTGAC GTCGCCCAAA ACCCCGTCAG TAGTGAGCGG TCCCATCTCG 
TCAACTGGGT CTGTTGGGAT GGATCCAGAA TCGGGTATGG ATTACTACGA TTCGACGGTT 
GGTCCGTATT CGGCTTCTCA GGGGGATGGT GGTCTACCAA CTGCGATCGC TCGTGGAAGT 
TTCGATCCTC GTGCCGATGG CTCTGGAGAC ACGTTCAATT CACACGTACT CACGACCGGA 
AAAGTGGATA TCACGGGAAG CGGTGATCTG ACTTTCGCAG GCGACCTCAT CTCGTCGTCC 
GACGATGACT CGAAAATGAG GGCAGCAGTG ACTGTCAATG GCGATTTCAG TACGGAAGGT 
AGTCTCGAGC TATCCTCGAA CAAGCGAAAA GTGTTCCAAG GCGACTTCTA TGTCGGTGAC 
GAATCCGGCG ACAACCTGGA TATTGGGCCA GGAACTGTCG GAGTTCAGGG AGATCTTCAT 
GTGGCCGGAT CCATCACTGG CCAGCCCAGT AATCTCAACG TAGCTGGACA GGTTCATGTC 
GGTGGTAGCT CCGGTTCGAT TTCAAAAGAT AGCTCGTCCC CGGATTCCCC ACTAGACCCG 
GGCATCAGCT CGATTCAGCA CAACGCTAAC CTGATCAGCC AGAAAAACAA CGAACTTTCG 
AACCCCACAA ACGACAACAC TGCCGAATCA GGTGATATTT CTGCTATCGA AAATGGTGGC 
TGTAGTCCAT GTGAACTTGA AGCCGGGGAT TACTACGTTG ACGAAATCGA TCTGACAAAA 
AATGAAAAAA TCATACTTGA TACATCTGAT GGCCCTATTC AACTGTTTGT AAATGGCCCA 
ACTGATGTGA AAGAAGCGAA CCTCACAATC AATGGATCGA ACGGTGCAGA GATCTACTCC 
AACGGAGAAG TGGATATTCA TAAGGATAGT GAAGTCGTAA CGAGGAACCC AAGGCAGTCC 
GCTTCTTCAC TCACCTGGTA TTTACCCCCG TCTGAAACTT TCCGTATAAA AGCTTCCACA 
TTCACGGGAT TGGTTGATGC GCCGAATGCC GACTTGAAGA TGAAAAGCGG AAGCGCTGAT 
CCCGTCATCT ACGGGGGAAT GATCGGAAAC TTTGACAGTA TCACGAAAGA CGCACAATTC 
CACTTTGACA ACGCATTACG ATCTGGCGGC GGTAGTGGTG GTAGTGGCTC TTCTGGATCG 
GGAGCAAACG AGATTGATTA CCTTCGAGTG ACTAATCCGA CAGTCGAAGT GCAAGAGGAG 
TAA 

 

Protein sequence

MAAVKVETSP GKPSRLNYQQ CIFVEIEFET ATITEIYFLA TIVIDIVSSK MGLSSDGSGE 
SRGLSSVMGF ALVFGMVIAG SMVIVSVGAV SLSESQSVVS MESAVTAMND VDATISSIRG 
HSGSQASIKL PDDGEYVNSG WIQIEITDSS GTVQNQTGKI TLGKYAYERD GQEVAYQGGG 
VWRGDGENFV MVSPPDFEYA GGPNPTLSFP ITSLEGVNAT GRSYSIAANR SNNISADTLP 
RGPIDPGNEV QITVHSKYAD GWARYLNKRA DGDVTKTGSK TVKLTLTSPK TPSVVSGPIS 
STGSVGMDPE SGMDYYDSTV GPYSASQGDG GLPTAIARGS FDPRADGSGD TFNSHVLTTG 
KVDITGSGDL TFAGDLISSS DDDSKMRAAV TVNGDFSTEG SLELSSNKRK VFQGDFYVGD 
ESGDNLDIGP GTVGVQGDLH VAGSITGQPS NLNVAGQVHV GGSSGSISKD SSSPDSPLDP 
GISSIQHNAN LISQKNNELS NPTNDNTAES GDISAIENGG CSPCELEAGD YYVDEIDLTK 
NEKIILDTSD GPIQLFVNGP TDVKEANLTI NGSNGAEIYS NGEVDIHKDS EVVTRNPRQS 
ASSLTWYLPP SETFRIKAST FTGLVDAPNA DLKMKSGSAD PVIYGGMIGN FDSITKDAQF 
HFDNALRSGG GSGGSGSSGS GANEIDYLRV TNPTVEVQEE