| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_2860 |
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| Symbol | |
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| ID | 8385169 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhabdus utahensis DSM 12940 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013158 |
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| Strand | + |
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| Start bp | 2935190 |
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| End bp | 2937226 |
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| Gene Length | 2037 bp |
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| Protein Length | 678 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 644973938 |
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| Product | type II secretion system protein |
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| Protein accession | YP_003131754 |
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| Protein GI | 257053921 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1955] Archaeal flagella assembly protein J |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCTGG AGCGCCGGCG CGCGGGGTCA CCCATCGGTG AAGCGGGGGG ACTCGGCGAT
ACGTTCTACC CACTGTTCGG CCGTCTATTC AACGAAGACG GCGATTTCGT CGCAAACGTC
GAAACGAAAC TGGCCGAAGC CCGGATGGCG GACAACGTCG AGATGTTCCT CTCGCGGGCC
CTGGCTGTCG GGTCCATCGC CGGCACGTCG TTGTGGCTCG TCGGCATGTT GCTCGGCTAT
CTGCTGGTCG CGACGGTCCT CGCCGGTCAG GTACCGTCCT TTCTGGGGCT GGGCTTCCCG
AAGAGCGTGC TCCCGGTTAT TCAGGCGCTG AAGCTGCCCT TCCTGATGAT CGTTTCGGGC
CTGTTGTTCG GCACGATCGG CTTTGCCGTC GGGTTCGGAT CGCTGGTTTC GATCCCGTAC
TTCCGGGCCA GTGCCCGTGA ACGCCAGATC AACGTGATGC TTTCGGACGC CGTCTCGTTC
ATGTACGCGC TGTCGGTCGG TGGCCTCAAC CAGCTCGACA TTCTCGAGGC GATCGCGGCC
GCCGACGACA CCTACGGCGA GGTCGCAAAG GAATTCCAGA GTATCGTCCT GGAGACGACG
TACTTCGATA CGGACTACCG CACAGCGATC CGGAACCAGG CCATCCAGAC GCCCAGCGAC
GAGTTGAGTC AGTTCCTGAC GGACATGCTC TCGATCGTCG ACTCCGGCGG GGACATGACG
TCGTTCCTCG AAGATCAGAA GAACAAGTAC ATGCGCACGA GCAAGCAGAC CCAGGAGCGC
ATGCTCGAAA CCCTCGAGCT GTTCGGGGAG ATGTACATGA CGCTGTCTTT GTTCCCGCTT
CTGTTGATCA TCATCCTCGT CGTGATGAGC ATGATGGGCA ACGCGAGCAC CCAGCTCATG
TACATCACCG TCTACGGGCT GATCCCGATG ATCAACGTCG CCTTCCTGGT GCTCGTCTCG
ACTGTCACTT CCGATGAGAG CAGCGATGGG TTCTTGCTCC CTGACGATCC AAAGATGCGC
GCCCAGATCG AAGGGGAAAC GAACCTGTTC AGCCTCGGTC TGATCGAGCA GTACACGGGG
AGCTACGACA TCTTCGATCG GATCAACGAC CGCGAAGGGA CCCACCAGGT CATTGATATA
CTGAAAGCAC CGCACATTTT CCTGCGCGAC AATCCGCCGT ACGTGCTTGC CGTGACGATC
CCCATCACGC TGGTTGCTCT GGTGCTCGCC GTGTTGATGG GGTGGGCACC CACCTCTCTG
GATGGGATGA TCGCCGACCC CCTTCAGGGA ACGTTCTTCT GGCTGTACGT GCCGGCGTAC
ATCAATTTCA TCCCCCTTGC GATCTTCCAC GAGTGGAACG TCCAGTACCG ACACTCGATC
ATCGGGAAGC TCTCGGAGAA CCTCCGAAAG CTCTCGAGTG CCAACGAGAC GGGGATGACG
TTGCTCGAGT CGCTGAATAT CGTCGCTCGG ACGTCCTCCG GTCGGCTGGC CGACGAGTTC
TCGATCATGC ACCGGAAAGT CCAGTACGGG ACGAACCTCA AGCAGGCACT CCGGGAGTTC
AACAACAAGT ATCACGTCCC GCGGCTGAGT CGAACGGTCA AACTCATCAG CGAGGCCCAG
GAGGCCTCCA ACCAGATCCA GGACGTGCTC TCGACGGCCG CCCAGGCCAG TGAAAACCAG
GACGACATCG ATCGTGACCG CAAGTCCCGG ACGCGGATGC AGGTCGTCAT CATCATCATG
ACGTTCCTGA CGCTTTTGGG CGTCATCGCC ATGCTGAAGG TCCAGTTCTT CGAGACGATG
GCCGGTCTCT CACAAACAGC CGACACCGGG GAGTCGATCG GCGGCCAGCA ATTCGGTTCG
AGCATGCCCA GCAACGACCT GCTCTCGATG CTGTTCTTCC ACGCAGTCTC GTTGCAAGCC
ATCTTCTCGG CGATCATCGC CGGTTACATC AGAAACGTCC GGATCATCTC GGGACTGAAG
TACGCCATTG CGCTGATGAC GATCTCGCTC GTGGTGTGGA TGGCCATCGG CGGGTGA
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| Protein sequence | MSLERRRAGS PIGEAGGLGD TFYPLFGRLF NEDGDFVANV ETKLAEARMA DNVEMFLSRA
LAVGSIAGTS LWLVGMLLGY LLVATVLAGQ VPSFLGLGFP KSVLPVIQAL KLPFLMIVSG
LLFGTIGFAV GFGSLVSIPY FRASARERQI NVMLSDAVSF MYALSVGGLN QLDILEAIAA
ADDTYGEVAK EFQSIVLETT YFDTDYRTAI RNQAIQTPSD ELSQFLTDML SIVDSGGDMT
SFLEDQKNKY MRTSKQTQER MLETLELFGE MYMTLSLFPL LLIIILVVMS MMGNASTQLM
YITVYGLIPM INVAFLVLVS TVTSDESSDG FLLPDDPKMR AQIEGETNLF SLGLIEQYTG
SYDIFDRIND REGTHQVIDI LKAPHIFLRD NPPYVLAVTI PITLVALVLA VLMGWAPTSL
DGMIADPLQG TFFWLYVPAY INFIPLAIFH EWNVQYRHSI IGKLSENLRK LSSANETGMT
LLESLNIVAR TSSGRLADEF SIMHRKVQYG TNLKQALREF NNKYHVPRLS RTVKLISEAQ
EASNQIQDVL STAAQASENQ DDIDRDRKSR TRMQVVIIIM TFLTLLGVIA MLKVQFFETM
AGLSQTADTG ESIGGQQFGS SMPSNDLLSM LFFHAVSLQA IFSAIIAGYI RNVRIISGLK
YAIALMTISL VVWMAIGG
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