| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_2842 |
|---|
| Symbol | |
|---|
| ID | 8385151 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhabdus utahensis DSM 12940 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013158 |
|---|
| Strand | + |
|---|
| Start bp | 2914468 |
|---|
| End bp | 2916174 |
|---|
| Gene Length | 1707 bp |
|---|
| Protein Length | 568 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 644973920 |
|---|
| Product | Beta-glucuronidase |
|---|
| Protein accession | YP_003131736 |
|---|
| Protein GI | 257053903 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3250] Beta-galactosidase/beta-glucuronidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0277834 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTATCTCC ACACCGAGAG CCGCGAAACG ACCACACTCG ACGGGACCTG GCAGGCGATC
CCGGACCCCT ACCGATCGTT CCAGGACGGG TGGTTCGACG ACCGGGACGT TCCCCTCCTC
GAAGACCCGC ACGCACCCGC CGATTACGAC GTCGATGACG GGTTCCCGGT CGAGGTGCCG
GGCTGCGTCG GCGAGCAGCT CCCGGAGTTC GAGTACTACG AGGGGATGGT CTGGCACACC
AGACGCTTCG ACCGGGAGGA CAACGGCAAC CGGCTCTTCC TGCGCTTTGG CGCGGTCAAC
TACGAGGCCG ACGTCTGGTT GAACGGCGAG CACCTCCTGA CCCACGAGGG AGGATACACC
CCCTTTTCGG TGGAAATCAC CGACGCGGTA TCTCGCGAAG ACAACCTTCT GGTCGTCGGT
GTCGATAACG AACGACGCGA GGACGGAATC CCAGGCATGC AGACCGACTG GTTCAACTTC
GGCGGTATCT CTCGGTCCGT GGATCTTCTC GCCACCCCGG AGACGTTCGT TCGGAACGTG
AACGTCGAGA CCAGCGTCGA CGAGACTGTG ACGGCGTCGA TCACCGCCTG GATCGACGGG
CCGGAACCGG GCGATGTCCA CGCGACGATA CCGGGCCTGG GTGCAGAGGC CCCGCTCGAA
CCAGACGATT CCGATGGAGC GGTTACCCGA CTCACCGGCG AGATCACGCT CGACCGGGAC
GACGTCGAGC TGTGGCACCC CGACGGCCCG CGGCTTTACG ATGTCTGCGT CGAATCGGAG
AGTGACGCCG TCGAAGTACG GACCGGCTTT CGTGCGGTCG ACGTCGAGGG CAGCGACATT
TTGGTCAACG GTGAGTCGAT CGAGATCCGT GGGATCTCGA TGCACGAAGA GGCCGCCGGA
CGCGGGCGGG CGCTGACTCC CGGCGATATC GATCAGCGAT TCGAGTGGGT GGCTGAACTC
GGCTGTAACT TCGTTCGGCT CGCCCATTAT CCACACACGG CGGCGATGGC TCGCCGGGCC
GACGAGGAGG GGATCCTGCT GTGGGAGGAG GTCCCGGCCT ACTGGGACAT CGATTTCGGC
GACAAAGACG TCCAGGCGCT GTATCGCCAG CAACTCCGCG AGTTGATCCA GCGTGACTGG
AACCGGCCGT CGGTCGCCCT GTGGTCGATC GCAAACGAGA CCGATCCCGA GGGCGAAGTG
CGAAATCGCG TCCTCCCCGA AATGGCCTCG TTCGCCCGGG AACTCGACGA TACGCGGCTC
GTGACTGCCG CCTGCTGGTT CGACGAGACT GACGACGGGC TGGCGTTGCT CGATCCGCTG
GTCGAGCATC TCGATGTCGT TGGAATCAAC GAGTACTACG GCTGGTACGT CGGCGACGCG
GGCGACGTTC GTTCGTTCGT CGACGATCCG ACGGGCCCGC CGGTCATCGT CTCGGAAACG
GGCGCGGGAG CGAAGTGGGG CAATCACGGC GACGAGGACG ACCGCTGGAC GGAGGAGTTC
CAGGCTGCCT ACTATCGCGA ATCGCTCGAA GCGATCGAGA GCGTCGAGCA GATCGTCGGG
ACAACTCCGT GGATCCTCTT TGACTTCAAG AGCCCCCGCC GGATGAATCC ACACCAGCGG
GGCTACAATC GCAAAGGGCT CCTCGACGAA CACGGTCGAA AGAAGCGTGC GTTCTCGGTG
CTGCGCGATC ACTACTGCGA CCCGTAG
|
|---|
| Protein sequence | MYLHTESRET TTLDGTWQAI PDPYRSFQDG WFDDRDVPLL EDPHAPADYD VDDGFPVEVP
GCVGEQLPEF EYYEGMVWHT RRFDREDNGN RLFLRFGAVN YEADVWLNGE HLLTHEGGYT
PFSVEITDAV SREDNLLVVG VDNERREDGI PGMQTDWFNF GGISRSVDLL ATPETFVRNV
NVETSVDETV TASITAWIDG PEPGDVHATI PGLGAEAPLE PDDSDGAVTR LTGEITLDRD
DVELWHPDGP RLYDVCVESE SDAVEVRTGF RAVDVEGSDI LVNGESIEIR GISMHEEAAG
RGRALTPGDI DQRFEWVAEL GCNFVRLAHY PHTAAMARRA DEEGILLWEE VPAYWDIDFG
DKDVQALYRQ QLRELIQRDW NRPSVALWSI ANETDPEGEV RNRVLPEMAS FARELDDTRL
VTAACWFDET DDGLALLDPL VEHLDVVGIN EYYGWYVGDA GDVRSFVDDP TGPPVIVSET
GAGAKWGNHG DEDDRWTEEF QAAYYRESLE AIESVEQIVG TTPWILFDFK SPRRMNPHQR
GYNRKGLLDE HGRKKRAFSV LRDHYCDP
|
|---|
| |