Gene Huta_2833 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_2833 
Symbol 
ID8385141 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand- 
Start bp2906268 
End bp2907197 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content62% 
IMG OID644973910 
Productsuccinate dehydrogenase and fumarate reductase iron-sulfur protein 
Protein accessionYP_003131727 
Protein GI257053894 
COG category[C] Energy production and conversion 
COG ID[COG0479] Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit 
TIGRFAM ID[TIGR00384] succinate dehydrogenase and fumarate reductase iron-sulfur protein 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.0372302 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTACTG ATTCAAACGC CGAGACGGGC ACCGACGCCG AATCGACGGC CGAGACGGAT 
GTCGAATCGG GGACTGACGC CGATGCCGAG CCGGCGGTCC CAGAACCGGA CATCTCGTCC 
CATCAACAAC GTCGGATGGA CGAAAAGCGC GAAGGGATGG CCGAACGCGA TGCACAAGCA 
GCGGCGGCTG CCGAGACCGA CGGGGAGACG ACCCACCTCC GGATCTTTCG GTACGATCCC 
GAGGTCGAGG GGAAGAGCGA GCCCCGGTTC GACGACTTTC AGGTCCCCTA CGAGCAGGGG 
ATGACTGTCC TCGACGCGTT GATTTACGCA CGCGATCACT TCGATTCGAC GCTGACCTTT 
CGTCACTCCT GTCAACAGGG CGTCTGTGGC TCTGACGCGC TGTTCGTCAA CGGCTCGCAG 
TATCTGGGCT GTAAGACCCA GTTGAACGAG TTCGACGAGC CGGTCCGGAT CGAACCGCTG 
CCCCACCAGG ACGTCGTCAA GGACCTGGTG GTCGACATGC AGCACTTCTA CGAGCAGATG 
GACGCCGTCG AGCCGTACTT CGAGCCCGAC GAGTTGCCCG AGGACGAACT CGAAGAGCAG 
CGCCAGACCC GAGAGAACCG CGAGAAGATC AAACTCTCGA CGCGATGCAT CCAGTGTGGG 
GCCTGTGCGT CCTCCTGTAA CGTCGCTGCG GGCGACAACA AGTATCTCGG CCCGGCGGCA 
CTCAACAAGG CCTACCGGTT CATCATGGAC GAGCGGGAAG GCGGCGAGCG GCGGGAAGAG 
CGCCTCGAAA TCGTCGAGGA CGAACACGGC GTCTGGCGGT GCCAGACCCA GTTCTCCTGT 
ACGGAGGTGT GTCCGAAGGA CATCCCCCTG ACCGAACACA TCCAGGAACT CAAGCGCGAA 
GCGATCAAGG AAGACATCAA ATTCTGGTGA
 
Protein sequence
MSTDSNAETG TDAESTAETD VESGTDADAE PAVPEPDISS HQQRRMDEKR EGMAERDAQA 
AAAAETDGET THLRIFRYDP EVEGKSEPRF DDFQVPYEQG MTVLDALIYA RDHFDSTLTF 
RHSCQQGVCG SDALFVNGSQ YLGCKTQLNE FDEPVRIEPL PHQDVVKDLV VDMQHFYEQM 
DAVEPYFEPD ELPEDELEEQ RQTRENREKI KLSTRCIQCG ACASSCNVAA GDNKYLGPAA 
LNKAYRFIMD EREGGERREE RLEIVEDEHG VWRCQTQFSC TEVCPKDIPL TEHIQELKRE 
AIKEDIKFW