| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_2815 |
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| Symbol | |
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| ID | 8385122 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhabdus utahensis DSM 12940 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013158 |
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| Strand | + |
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| Start bp | 2886801 |
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| End bp | 2889209 |
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| Gene Length | 2409 bp |
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| Protein Length | 802 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644973891 |
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| Product | type II secretion system protein |
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| Protein accession | YP_003131709 |
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| Protein GI | 257053876 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1955] Archaeal flagella assembly protein J |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTCTCA CGGGATACCT GCCGCTGATC GGCGCACTCG CGCTGGCTGG AATGCTTGGG
CTGACCCGCG TCAGTCCCCA TGCCGACAGA GTGTTCACCC GTGTCGCCCG CCAGTATTTC
AGCCAGCACA TCGAGGAGTC ACCGGTCCGC AAGCGTCTGC TGGCGTCGGC ATACGTCGAG
ACGACCTATC GCGTATACGC GGCCAAGACG TACCTCTACA CCGCGCTCGC GGCCCTCATC
GGCGGTGTCG TCGGGGTCTA TGTCGTTGGC GGAGCGCTGG TGGTCATTCC GACGATCGCC
GCCGTCCTCG CGGATCTCCC GTCGGTCATG GGCGACGCCC TGGGTAACCG GAATCTCGAG
ATCGTTCTCC CGGCCGACCA GGTGTTTATC GTCCTGACCG CCGGTGGCGT CGTGCTCGGA
GCGCTTTCGG CGGTCGTGAC CTACGTGGCA CGCTGGCAAC TCCCGGCAGG GACCGCCGAG
GTTCGCCGTC GCGGCATCAA CGAAGCGCTC CCTCGGACGG TCGCGTTCAC CTACGCCCTC
TCCAGGGGTG GGCTCGCGTT CCCGGACGTG ATGCGGACAC TCGGACGCAA CCGGGAAATC
TACGGGGACG CGGCCGACGA GGTGAGCGTC GCCGTCCGGG AGATGGACGT CTTCGGGACG
GACATGATCT CGGCGATCAG GCGCACGGCC CACCGGAGTC CGAGCGACAC GTTCCGGACG
TTCGGCGAGA ACCTCGCGAG CGTGCTCGCC AGCGGGCAAC ACATCCCCGC GTTCCTCGAA
GACCAGTACG ACCGCCTTCA GGAGGAGGCC GAACAGCGCC AGGAAGAGGT CCTGGAACTG
CTCGCAACGA TTGCCGAGGC GTACGTCACG ACGCTCGTGG CCGGTGTCCT GTTTTTGCTC
ACGATCCTGC TGGTGTTCGG GCTGACGGTG ACCGAAACGC TGCCCTTCCT GCAGTTGCTC
ACGTATCTCA TCATTCCGCT GTCGAATGCC CTGTTCGTCG TCTTTCTCGT CCAGAAACTC
GAGGAACTCG GTGTCGCCCG CGAGAGTGGC GTCGCCGCAC TCGAGGGTGG CTCCCCGGAC
CAGAACGCCC CTCAGACGCC GACTGCGACC GCGGATGGGG GTCATCTCAG GCGGTTGTCG
GCCGGCCGAT CACAGCTCGC CCTGTACGAC CGAATCAGTC GATTCAAGCG CGTGCTTCGC
CGTCCAGCCC AGACTATCAT CTGGAACCCA ACCCGGATTT TCTACCTGAC CGTTCCGATC
GCACTGGTGT GGGTGGCTCT TCGTGCACCG GGGACGATCA CGGGCTACGG CTTCAATCTC
AGGCTGGCCG ACGACCTGCT CGTCCAGACC ACGCTCTTTC TGATCGGGAC CTTCGCCGTC
GTCCGTGAGA TCTACTCCCG GCGGATCGAT CGGATTGAGG CCGCCACGCC CGAGTTGCTC
GAACGCCTGG CGAGTCTCAA CGAGGCGGGG ATGTCCTTCG TCGAAAGTCT CGACCGGGTG
CGTGACTCGG ATCTCGGTGT GCTGACTGAC GAGGTCGATC GCATCTGGAC GGACATTTCG
ATGGGTGCCA ATTCGCCCGA CGCCCTCCGA CGCTTCGGCC AGCGCGTCAG GACCGCATCG
ATCGCTCGGG TCGTCACCCT TCTCATGCAC GCGATGCGGG CGAGCGGTCG CCTGGGTCCC
GTGCTCCGGA TCGCGTCCTC CCAGGCCCGT TCGGATCTCG AACTCCGGCG GGAACGTCGC
CAGCAGATGT TCACCTACCT GGTCGTGATC TACGTCTCGT TTTTCGTCTT TCTGGTCATC
ATCTTCGCCG TCGAGGAGGT GCTCGTCCCG AGTCTGCCGG ATAACGTCCC GGTCCCCGAA
TCCAATCGCC TGGGCGTCGA CGTCAGCGCG TTCGCCCGCC TCGGGCAGGT CAACAAGCCG
GCCTACACGT TGATTTTTCT GCACGCCGCG TTGATTCAGG CCGTCCTCTC GGGATTGGTT
GCTGGACTCC TCGGCGAGGG TACCATCAAG GATGGCGCGA AACACGCCGC GATACTGCTC
GGGATCGCGT ACGTCGCGAT CCTGGTCGCG ACCTCGCCCG TGGCCTCGCT GACGATGCAG
AGCCAGGAGA CGCTCGGCGA TGGCGTCACG ATCGGCTCGG TCTCGACGTC TGAAGGTGGG
TTCGTCGTGA TCCACGAGCG GACCGCCGAT GGCGATATCG TTGGTCACAC CGGCTACCTG
CCGTCGGGCG AACACACGAA CGTCCGTGTC CAACTCGACG AGACGTTACA GCGCCAGACC
ACGCTCGTGG CCGTGCCGTA TCTCGATAGC GACGGCGACG GGCGCTTCAC CGTCGGTACC
GACCAGCCCT ACGCGACGGG CGGCGACCCA GTGGCTGTCG ACGCAGACAT CACACCGGTC
GAAACGTGA
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| Protein sequence | MSLTGYLPLI GALALAGMLG LTRVSPHADR VFTRVARQYF SQHIEESPVR KRLLASAYVE
TTYRVYAAKT YLYTALAALI GGVVGVYVVG GALVVIPTIA AVLADLPSVM GDALGNRNLE
IVLPADQVFI VLTAGGVVLG ALSAVVTYVA RWQLPAGTAE VRRRGINEAL PRTVAFTYAL
SRGGLAFPDV MRTLGRNREI YGDAADEVSV AVREMDVFGT DMISAIRRTA HRSPSDTFRT
FGENLASVLA SGQHIPAFLE DQYDRLQEEA EQRQEEVLEL LATIAEAYVT TLVAGVLFLL
TILLVFGLTV TETLPFLQLL TYLIIPLSNA LFVVFLVQKL EELGVARESG VAALEGGSPD
QNAPQTPTAT ADGGHLRRLS AGRSQLALYD RISRFKRVLR RPAQTIIWNP TRIFYLTVPI
ALVWVALRAP GTITGYGFNL RLADDLLVQT TLFLIGTFAV VREIYSRRID RIEAATPELL
ERLASLNEAG MSFVESLDRV RDSDLGVLTD EVDRIWTDIS MGANSPDALR RFGQRVRTAS
IARVVTLLMH AMRASGRLGP VLRIASSQAR SDLELRRERR QQMFTYLVVI YVSFFVFLVI
IFAVEEVLVP SLPDNVPVPE SNRLGVDVSA FARLGQVNKP AYTLIFLHAA LIQAVLSGLV
AGLLGEGTIK DGAKHAAILL GIAYVAILVA TSPVASLTMQ SQETLGDGVT IGSVSTSEGG
FVVIHERTAD GDIVGHTGYL PSGEHTNVRV QLDETLQRQT TLVAVPYLDS DGDGRFTVGT
DQPYATGGDP VAVDADITPV ET
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