Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Huta_2814 |
Symbol | |
ID | 8385121 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhabdus utahensis DSM 12940 |
Kingdom | Archaea |
Replicon accession | NC_013158 |
Strand | + |
Start bp | 2885129 |
End bp | 2886799 |
Gene Length | 1671 bp |
Protein Length | 556 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644973890 |
Product | type II secretion system protein E |
Protein accession | YP_003131708 |
Protein GI | 257053875 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0630] Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTGAAC CCCATCGTCG TACTGATCAG GAGGCGGGAA CGCTGTCGGG AACAGCCACA AGCACGGCCG AAGCGGACGA ATCGGTCGGC CGCCTGGGTT CGGCGAAAGA GTGGCTCGTC CGGGTCGCGC GCGTCCTCGC CGGATCGCAG GTCGCCGTCG AGAACTACGA TCCGCGAAGG CACGATCACC TGACGGATTT CGGCGGGCTT GCGGGGATGG ACGAGATCGA CCGGTACTGG CTCAACGCCC CGTATGCGTT CGCCTCGATC AACTACGATC CCGAGCGCGA CGAACACCGG TATCACGTCG TCGAACCCGG ACTCGACGAT TTCGAACGTG ACCTGCTGGA CCGACTGTTC GAGGACGTCC GTGATCCGCT GCTCTATCGC GCCGACGTCG ACGAGGACCC GGAAGGGGCC CTGCTTGCGG AACTCCGGGA CCGCCTCGAA GAGTACGGCG TCGACGTCCG GATCGAGACG GTCCATCGAC TGTTCTATTA TCTCTTCAGG GAGTTCCAGG GCTACGGCAA GATCGACCCG CTGATGCACG ATCCTGCGAT CGAGGACATC TCGTGTGACG GCGCGAGTTT GCCGATCTTC GTCTATCACG ACGCTTACAC TGACGTCGAG ACGAACATCA CATACGACGA GTCCGAACTC GAAAATCTCG TGGTTCAACT CGCCCAGCGG TCGGGTCGGC ATATCAGCGT CGCCGATCCC GTCGTCTCGA CGACGCTGCC GGACGGCTCC CGGATCGAAC TCGCCCTGGG GACGGAAGTA ACTCCGCGCG GGTCGGCCTT TACCATCCGG AAGTACGCGG AGGACCCGTT CACACCGATC GACCTCCTCA AGTACGGAAC CTTCAACCGG GAGATGCTCG CGTATCTCTG GCTCGCGATC GAGCACAACA AGTCGCTGCT GTTCGCCGGC GGGACCGCAG CCGGGAAGAC GACGTCGATG AACGCGGTCT CGATGTTCAT CCCTCCGCGG GCGAAAGTAC TCACCATCGA GGACACGCGG GAACTCTCGC TGTATCACGA CAACTGGCTG TCCTCGGTCA CCCGCGAGCG CTTCGACGAG GACGACATCT CGATGTACGA CCTGCTGCGG TCGGCACTCC GGCACCGTCC GGAGTACATC GTGGTCGGCG AGGTGCGTGG CGAGGAAGCG ATCACGCTGT TCCAGGCGAT GAACACGGGC CACACGACGT TCTCGACGAT GCACGCCGAC TCGGTCCAGA CGGTCATCAA TCGCCTGGAG AACGAGCCGA TCAACGTGCC CCGGCCGATG GTCCAGAGCC TGGACATTCT GGCCGTCCAG GTGTTGACGC GTCAGGGCGA CGAGCGGGTT CGCCGGGCGA AGACGCTGGC CGAGATCGAA GGCATCGACC AGCGAACGGG CGAACTCGAT TACGCCAACG CCTACGAGTG GCAACCGACC GCGGACGGCT ACGCGGAGCG TGATTCTTCG CTGCTCGAAG ATATCCGTGA GGAACGCGGC TGGAGTCAGG CCGAACTCCT TCGGGAACTC GAGGATCGTG AACGCTTCCT CGCCTATCTC CTGGAGGAAG ACGTCACGGA CTATCGCCGG TTTACGTCGT TCGTGAACCG ATACTACGCC GATAAGGACG CTGTCCTCTC GACGATCGAG GCGCAGCCGG ACACGGAGTG A
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Protein sequence | MSEPHRRTDQ EAGTLSGTAT STAEADESVG RLGSAKEWLV RVARVLAGSQ VAVENYDPRR HDHLTDFGGL AGMDEIDRYW LNAPYAFASI NYDPERDEHR YHVVEPGLDD FERDLLDRLF EDVRDPLLYR ADVDEDPEGA LLAELRDRLE EYGVDVRIET VHRLFYYLFR EFQGYGKIDP LMHDPAIEDI SCDGASLPIF VYHDAYTDVE TNITYDESEL ENLVVQLAQR SGRHISVADP VVSTTLPDGS RIELALGTEV TPRGSAFTIR KYAEDPFTPI DLLKYGTFNR EMLAYLWLAI EHNKSLLFAG GTAAGKTTSM NAVSMFIPPR AKVLTIEDTR ELSLYHDNWL SSVTRERFDE DDISMYDLLR SALRHRPEYI VVGEVRGEEA ITLFQAMNTG HTTFSTMHAD SVQTVINRLE NEPINVPRPM VQSLDILAVQ VLTRQGDERV RRAKTLAEIE GIDQRTGELD YANAYEWQPT ADGYAERDSS LLEDIREERG WSQAELLREL EDRERFLAYL LEEDVTDYRR FTSFVNRYYA DKDAVLSTIE AQPDTE
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