Gene Huta_2814 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_2814 
Symbol 
ID8385121 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand
Start bp2885129 
End bp2886799 
Gene Length1671 bp 
Protein Length556 aa 
Translation table11 
GC content63% 
IMG OID644973890 
Producttype II secretion system protein E 
Protein accessionYP_003131708 
Protein GI257053875 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0630] Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGAAC CCCATCGTCG TACTGATCAG GAGGCGGGAA CGCTGTCGGG AACAGCCACA 
AGCACGGCCG AAGCGGACGA ATCGGTCGGC CGCCTGGGTT CGGCGAAAGA GTGGCTCGTC
CGGGTCGCGC GCGTCCTCGC CGGATCGCAG GTCGCCGTCG AGAACTACGA TCCGCGAAGG
CACGATCACC TGACGGATTT CGGCGGGCTT GCGGGGATGG ACGAGATCGA CCGGTACTGG
CTCAACGCCC CGTATGCGTT CGCCTCGATC AACTACGATC CCGAGCGCGA CGAACACCGG
TATCACGTCG TCGAACCCGG ACTCGACGAT TTCGAACGTG ACCTGCTGGA CCGACTGTTC
GAGGACGTCC GTGATCCGCT GCTCTATCGC GCCGACGTCG ACGAGGACCC GGAAGGGGCC
CTGCTTGCGG AACTCCGGGA CCGCCTCGAA GAGTACGGCG TCGACGTCCG GATCGAGACG
GTCCATCGAC TGTTCTATTA TCTCTTCAGG GAGTTCCAGG GCTACGGCAA GATCGACCCG
CTGATGCACG ATCCTGCGAT CGAGGACATC TCGTGTGACG GCGCGAGTTT GCCGATCTTC
GTCTATCACG ACGCTTACAC TGACGTCGAG ACGAACATCA CATACGACGA GTCCGAACTC
GAAAATCTCG TGGTTCAACT CGCCCAGCGG TCGGGTCGGC ATATCAGCGT CGCCGATCCC
GTCGTCTCGA CGACGCTGCC GGACGGCTCC CGGATCGAAC TCGCCCTGGG GACGGAAGTA
ACTCCGCGCG GGTCGGCCTT TACCATCCGG AAGTACGCGG AGGACCCGTT CACACCGATC
GACCTCCTCA AGTACGGAAC CTTCAACCGG GAGATGCTCG CGTATCTCTG GCTCGCGATC
GAGCACAACA AGTCGCTGCT GTTCGCCGGC GGGACCGCAG CCGGGAAGAC GACGTCGATG
AACGCGGTCT CGATGTTCAT CCCTCCGCGG GCGAAAGTAC TCACCATCGA GGACACGCGG
GAACTCTCGC TGTATCACGA CAACTGGCTG TCCTCGGTCA CCCGCGAGCG CTTCGACGAG
GACGACATCT CGATGTACGA CCTGCTGCGG TCGGCACTCC GGCACCGTCC GGAGTACATC
GTGGTCGGCG AGGTGCGTGG CGAGGAAGCG ATCACGCTGT TCCAGGCGAT GAACACGGGC
CACACGACGT TCTCGACGAT GCACGCCGAC TCGGTCCAGA CGGTCATCAA TCGCCTGGAG
AACGAGCCGA TCAACGTGCC CCGGCCGATG GTCCAGAGCC TGGACATTCT GGCCGTCCAG
GTGTTGACGC GTCAGGGCGA CGAGCGGGTT CGCCGGGCGA AGACGCTGGC CGAGATCGAA
GGCATCGACC AGCGAACGGG CGAACTCGAT TACGCCAACG CCTACGAGTG GCAACCGACC
GCGGACGGCT ACGCGGAGCG TGATTCTTCG CTGCTCGAAG ATATCCGTGA GGAACGCGGC
TGGAGTCAGG CCGAACTCCT TCGGGAACTC GAGGATCGTG AACGCTTCCT CGCCTATCTC
CTGGAGGAAG ACGTCACGGA CTATCGCCGG TTTACGTCGT TCGTGAACCG ATACTACGCC
GATAAGGACG CTGTCCTCTC GACGATCGAG GCGCAGCCGG ACACGGAGTG A
 
Protein sequence
MSEPHRRTDQ EAGTLSGTAT STAEADESVG RLGSAKEWLV RVARVLAGSQ VAVENYDPRR 
HDHLTDFGGL AGMDEIDRYW LNAPYAFASI NYDPERDEHR YHVVEPGLDD FERDLLDRLF
EDVRDPLLYR ADVDEDPEGA LLAELRDRLE EYGVDVRIET VHRLFYYLFR EFQGYGKIDP
LMHDPAIEDI SCDGASLPIF VYHDAYTDVE TNITYDESEL ENLVVQLAQR SGRHISVADP
VVSTTLPDGS RIELALGTEV TPRGSAFTIR KYAEDPFTPI DLLKYGTFNR EMLAYLWLAI
EHNKSLLFAG GTAAGKTTSM NAVSMFIPPR AKVLTIEDTR ELSLYHDNWL SSVTRERFDE
DDISMYDLLR SALRHRPEYI VVGEVRGEEA ITLFQAMNTG HTTFSTMHAD SVQTVINRLE
NEPINVPRPM VQSLDILAVQ VLTRQGDERV RRAKTLAEIE GIDQRTGELD YANAYEWQPT
ADGYAERDSS LLEDIREERG WSQAELLREL EDRERFLAYL LEEDVTDYRR FTSFVNRYYA
DKDAVLSTIE AQPDTE