| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_2806 |
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| Symbol | |
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| ID | 8385113 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhabdus utahensis DSM 12940 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013158 |
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| Strand | + |
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| Start bp | 2876015 |
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| End bp | 2876740 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644973882 |
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| Product | putative RNA-associated protein |
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| Protein accession | YP_003131700 |
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| Protein GI | 257053867 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1500] Predicted exosome subunit |
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| TIGRFAM ID | [TIGR00291] rRNA metabolism protein, SBDS family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.216017 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATATCCC TTGACGAGGC TGTGACGGCC CGTCTGGAAA CCCACGGCGA GCGCTTCGAG
GTACTGGTCG ATCCCGACGC GGCCCTGTCG ATGAAGCGTG ACGACTTCGA CGGTGATCTC
GAGGACGTCA TCGCCGCCGA GGACGTCTTC GAGAACGCCT CGCGCGGTGA CCGCCCGCCG
GAGAACGCCC TCGAAGAGGT TTTCGGGACG ACCGAACCCT TAGAGATCAT TCCAGAGGTC
ATCCAGGACG GGGAGATCCA GATCACCGCC GACCAGCGCC GGGAGATGCA GGAGCGCAAA
CACCGCGAAC TCGTCCAGCG CATCACCCGG AATGCGGTCA ATCCCCAGAT GGACGACGCG
CCCCATCCCC CGGACCGGAT CGAGTCGGCC CTGGAGGAAG CTGGATTCCA GATCGATCCA
ATGGAACCCG TCGAAACCCA GGTCGACGAT GCACTCGATG CACTCAGACC GGTGATCCCC
ATTCGGTTCG ACGAGGTGAC TGTCGCGGTT CAGCTCCCCC CTGATTACGC GGGGAGCGGG
CAGGCGAAGA TCCGGGAGTT CGGCGATCTT GAGAGCGAGG AATGGCAAAG CGACGGCTCC
TGGGTCGGCG TGTTGACGTT CCCAGCCGGA CTCCAAAACG ACTTTTTCGA ACTCGCAAAC
GAGGTTTCCA GTGGTGAAGC CGAAACTCGC ATCATCAAGG ACGAAGACGA CATCAAAACC
CGGTAG
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| Protein sequence | MISLDEAVTA RLETHGERFE VLVDPDAALS MKRDDFDGDL EDVIAAEDVF ENASRGDRPP
ENALEEVFGT TEPLEIIPEV IQDGEIQITA DQRREMQERK HRELVQRITR NAVNPQMDDA
PHPPDRIESA LEEAGFQIDP MEPVETQVDD ALDALRPVIP IRFDEVTVAV QLPPDYAGSG
QAKIREFGDL ESEEWQSDGS WVGVLTFPAG LQNDFFELAN EVSSGEAETR IIKDEDDIKT
R
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