Gene Huta_2801 details

Gene Information

• Locus tag: Huta_2801
• ID: 8385108
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halorhabdus utahensis DSM 12940
• Kingdom: Archaea
• Replicon accession: NC_013158
• Strand: +
• Start bp: 2871523
• End bp: 2872002
• Gene Length: 480 bp
• Protein Length: 159 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 644973877
• Product: Ribonuclease P-related
• Protein accession: YP_003131695
• Protein GI: 257053862
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG1369] RNase P/RNase MRP subunit POP5

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAACACC TTCCGAAGCA CTTCCGGCAG CGCTGGCGAT ATCTCGCAGT CGAACTCGAA 
ACCTGGCCGG ACGCCGACTT CGACCGCGGG GATTTCCAGC GCCACCTCTG GTTTGCGGCC 
CAGAACCTGC TCGGAGATGT CGGCTCTGCG GCGGTCGATC TTTCGGTCGT CCGCTTCGAG 
CAAGCGGGGC CAACCGGCAC AGCGATCATC CGAACACGCC GGGGGGAGGT CTCCCAAGCG 
CGGGCAGTTC TCGCCACGCT CGAATCCGTC GACGCCGACC CAGTCGGCCT CCGTGTCCGA 
GGCGTCAGTG GCACCGTGCG TGCGTGTGAG GAAAAGTATT TAGGAGGGCG TCCGGAATCC 
ACCGAGCACG ACGACGTCGC CTTTGCGGGA ACCGATCGAC CTGCAGTGAT CCGGGCTGGC 
CGGGTAGATG TACACGTCGA CGACGGCTTC ATCGGGGCGA CGCAACGCGA CCTCTCATAA 

 

Protein sequence

MKHLPKHFRQ RWRYLAVELE TWPDADFDRG DFQRHLWFAA QNLLGDVGSA AVDLSVVRFE 
QAGPTGTAII RTRRGEVSQA RAVLATLESV DADPVGLRVR GVSGTVRACE EKYLGGRPES 
TEHDDVAFAG TDRPAVIRAG RVDVHVDDGF IGATQRDLS