Gene Huta_2769 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_2769 
Symbol 
ID8385075 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand
Start bp2842282 
End bp2843523 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content63% 
IMG OID644973844 
ProductABC-2 type transporter 
Protein accessionYP_003131663 
Protein GI257053830 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.160651 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCGAA TCGCCGCGTT GCTCAATGCG CTGTTGCGCG ATTGGTCGCG TTCCCGGGAG 
ACTGTCTTCT TTGTCGTGCT GTTTCCGATC ATCCTGCTGG TGATCTTCAG TACCGTCTTT
GCGTCCAGTG CGCCGTCGTT CGCACTGGTC GTCCAGAACC AGGACATCGG GGCTGGGGGC
GAAGCGACGA ACCTCTCCTC GACCTTTGTC GAGAATCTGG CGGGGATCGA GCCCCTGGAC
GTTCAGCACC TCAACGCCGA TCGGAACCTG ACCGAATGGA GCCAGGAGAG CGACGGCGGT
GGTCGTGTGC TGGTTCTCCC CGACGGCTTC GCCGAGGAGG TCCGGGCTCA GAGCGGCCGC
GCTCGCATCG CGATCATCCG GGATACCGTC GCCCGGTTTC AGGATGACAT GAACGAGAGC
GAGCGAGCGA ACATTGAGCG GGGCTTAGAC CAGGCAAGCC AGCAGAACGC GACGAACGCG
ACCGGTGCCA CACTGGCGTT TTACGCTCCA CCGGACGACC AGTCGGCACC CGTCGTCCGT
GGGATCCTCT CGACTGTCAT CGCCGAGTTC AATCAGGAGT CACTCGGTAT CGACGAACCG
CCCGTCAGTC TGGATTCGGG AACGATCGGG TCGGCCGGGC TGACGTCGAC CGACTACTAC
CTGCCGGCGT TCATCGCCAC GCTGGTGTTG ATCAACGGCG TGATGACGGT CCCCGGGGTG
ATCGCCGGGT TCAACCAGGA CGGGACGCTC AAGCGGCTCG TGGCGACACC CCTGCGAAAG
CGCGACTGGA TCATCGCGAA CATCGTCCAG CAATCGTTGC TCGCCCTCCT GCTTTCTGGG
GTGATGCTGG TCGTCGCAGC GATGCTCTTC GGCGTGACCG TGATTCCCGG GCCGCTCTCG
ATCGCGCTCG TCTTGCTCGG GGCGATCGCG TTTTCGGCGC TCGGAATGAC CCTCGGAAGC
CTCCTGCCGA ACCCTGACGC AGCCAGCAGT CTCGGCGGGT CGATCGCGTT CCCGATGATG
TTCCTCTCGG GCGTCTTCTG GGAGATCGAC ATCATGCCCG AGACGTTACA GACGATCGGC
CGGCTCATGC CGCTCTATCA GTTCCATCGC GGACTCCGCC AGCTCATGAT CGTCGAAACC
ACCGAGGGCG TGTGGCCAGC GTTCGCCATG TTGGGCGGGA TGGCCGTCGT CTTCGTGCTC
CTCGCCATTC GGCTGACACG CTGGCAGGAT TTCGGCGATT GA
 
Protein sequence
MKRIAALLNA LLRDWSRSRE TVFFVVLFPI ILLVIFSTVF ASSAPSFALV VQNQDIGAGG 
EATNLSSTFV ENLAGIEPLD VQHLNADRNL TEWSQESDGG GRVLVLPDGF AEEVRAQSGR
ARIAIIRDTV ARFQDDMNES ERANIERGLD QASQQNATNA TGATLAFYAP PDDQSAPVVR
GILSTVIAEF NQESLGIDEP PVSLDSGTIG SAGLTSTDYY LPAFIATLVL INGVMTVPGV
IAGFNQDGTL KRLVATPLRK RDWIIANIVQ QSLLALLLSG VMLVVAAMLF GVTVIPGPLS
IALVLLGAIA FSALGMTLGS LLPNPDAASS LGGSIAFPMM FLSGVFWEID IMPETLQTIG
RLMPLYQFHR GLRQLMIVET TEGVWPAFAM LGGMAVVFVL LAIRLTRWQD FGD