Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Huta_2769 |
Symbol | |
ID | 8385075 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhabdus utahensis DSM 12940 |
Kingdom | Archaea |
Replicon accession | NC_013158 |
Strand | - |
Start bp | 2842282 |
End bp | 2843523 |
Gene Length | 1242 bp |
Protein Length | 413 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644973844 |
Product | ABC-2 type transporter |
Protein accession | YP_003131663 |
Protein GI | 257053830 |
COG category | [V] Defense mechanisms |
COG ID | [COG0842] ABC-type multidrug transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.160651 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCGAA TCGCCGCGTT GCTCAATGCG CTGTTGCGCG ATTGGTCGCG TTCCCGGGAG ACTGTCTTCT TTGTCGTGCT GTTTCCGATC ATCCTGCTGG TGATCTTCAG TACCGTCTTT GCGTCCAGTG CGCCGTCGTT CGCACTGGTC GTCCAGAACC AGGACATCGG GGCTGGGGGC GAAGCGACGA ACCTCTCCTC GACCTTTGTC GAGAATCTGG CGGGGATCGA GCCCCTGGAC GTTCAGCACC TCAACGCCGA TCGGAACCTG ACCGAATGGA GCCAGGAGAG CGACGGCGGT GGTCGTGTGC TGGTTCTCCC CGACGGCTTC GCCGAGGAGG TCCGGGCTCA GAGCGGCCGC GCTCGCATCG CGATCATCCG GGATACCGTC GCCCGGTTTC AGGATGACAT GAACGAGAGC GAGCGAGCGA ACATTGAGCG GGGCTTAGAC CAGGCAAGCC AGCAGAACGC GACGAACGCG ACCGGTGCCA CACTGGCGTT TTACGCTCCA CCGGACGACC AGTCGGCACC CGTCGTCCGT GGGATCCTCT CGACTGTCAT CGCCGAGTTC AATCAGGAGT CACTCGGTAT CGACGAACCG CCCGTCAGTC TGGATTCGGG AACGATCGGG TCGGCCGGGC TGACGTCGAC CGACTACTAC CTGCCGGCGT TCATCGCCAC GCTGGTGTTG ATCAACGGCG TGATGACGGT CCCCGGGGTG ATCGCCGGGT TCAACCAGGA CGGGACGCTC AAGCGGCTCG TGGCGACACC CCTGCGAAAG CGCGACTGGA TCATCGCGAA CATCGTCCAG CAATCGTTGC TCGCCCTCCT GCTTTCTGGG GTGATGCTGG TCGTCGCAGC GATGCTCTTC GGCGTGACCG TGATTCCCGG GCCGCTCTCG ATCGCGCTCG TCTTGCTCGG GGCGATCGCG TTTTCGGCGC TCGGAATGAC CCTCGGAAGC CTCCTGCCGA ACCCTGACGC AGCCAGCAGT CTCGGCGGGT CGATCGCGTT CCCGATGATG TTCCTCTCGG GCGTCTTCTG GGAGATCGAC ATCATGCCCG AGACGTTACA GACGATCGGC CGGCTCATGC CGCTCTATCA GTTCCATCGC GGACTCCGCC AGCTCATGAT CGTCGAAACC ACCGAGGGCG TGTGGCCAGC GTTCGCCATG TTGGGCGGGA TGGCCGTCGT CTTCGTGCTC CTCGCCATTC GGCTGACACG CTGGCAGGAT TTCGGCGATT GA
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Protein sequence | MKRIAALLNA LLRDWSRSRE TVFFVVLFPI ILLVIFSTVF ASSAPSFALV VQNQDIGAGG EATNLSSTFV ENLAGIEPLD VQHLNADRNL TEWSQESDGG GRVLVLPDGF AEEVRAQSGR ARIAIIRDTV ARFQDDMNES ERANIERGLD QASQQNATNA TGATLAFYAP PDDQSAPVVR GILSTVIAEF NQESLGIDEP PVSLDSGTIG SAGLTSTDYY LPAFIATLVL INGVMTVPGV IAGFNQDGTL KRLVATPLRK RDWIIANIVQ QSLLALLLSG VMLVVAAMLF GVTVIPGPLS IALVLLGAIA FSALGMTLGS LLPNPDAASS LGGSIAFPMM FLSGVFWEID IMPETLQTIG RLMPLYQFHR GLRQLMIVET TEGVWPAFAM LGGMAVVFVL LAIRLTRWQD FGD
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