| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_2741 |
|---|
| Symbol | |
|---|
| ID | 8385046 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhabdus utahensis DSM 12940 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013158 |
|---|
| Strand | + |
|---|
| Start bp | 2811145 |
|---|
| End bp | 2812641 |
|---|
| Gene Length | 1497 bp |
|---|
| Protein Length | 498 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 644973815 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003131635 |
|---|
| Protein GI | 257053802 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG2267] Lysophospholipase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGAACTC GCCGCCGTTT CCTCCAGACG TGCATTGCCC TCTCCGGGGC GTCGCTGGCC
GGCTGTTCGG AGGACGACGA ATCGACGACA CCGACGAGCA CCACGACGAC AGCGGTGTCC
ACGACAGCCT CGACGCCGGA AACCGACACG GCGACACCGG AACCGAGCGA GTCGACAGCG
ACCGACGAGC CCACAGAAAC GACCGAACCG ACTGAGACGG AATCCATCGA TCCGGAGACA
CTCAAAGAGA CCGGACGGGC GTTCGTCAAC CAACTCGCTG CCGGCGAGTA CGCCGCGATC
ATGGACGACT ACGCGTTTTC CGAACAGTTC GCCGCCCAGG TTGACGCCGA GCAGCTCGAA
TCGATCTGGA CCACCCAGAC TGCGTCCCTC GGGCAGTTCG TCGAACTCGC CGGAGCGGAG
TACAGCCGAT CGGACGGGTA TCACGTCACC GTGGTCCTCG CGCGCTTCAC CGGCGGTCGA
CAGGCGGTCC GGCTCGTCTT CGACGACACC GCAACGATCG TCGGGCTGTT TTTCCCGGCG
TCGGGCGGCT CCTATTCCCC GCCGGAGTAC GTCAACCAGT CGGCGTTCGA GGAAGTCGAT
CGAACGATCG CGGCCACCGA AACCTGCTCA CTCCCCGCAA AGCTCACGCT CCCGACAGGC
GAGGAGTCGA TCCCCGGCGT CGTCCTCGTC CACGGATCAG GCCCCAACGA CATGGACGAG
ACGCTGGGGC CGAACAAACC GTTCAAGGAT CTCGCGTGGG GGCTGGCGAG CCGTGGCGTC
GCCGTCCTCC GGTATGACAA GCGAACGCAT GCCTGTGACG TCGATCGGGC CGCGCTCACG
CTCGACGAGA AGGTCACTGA CGACGCGTTG ACGGCGCTTG GCGTCCTCCG TGAACACCCC
CGGATCGACC CCTCCCGAAC TGTCGTCGTC GGTCACTCCA TCGGCGCGAT GACTGCACCG
CGGATCGCCG ACCGCGACGG CTCGGTTGCG GGTGCAGTCA TGCTGGCTGG CAACGCTCGC
CCACTACTGG ACGTCATTCC GGAGCAACAG GAGTACCTGT TCCGTCTGGA CGGGGAACTC
AGCGACGAGG AGGCGACCCA ACTCCAGGCG GTCGAACAAA CGGTCGAACG AATTCGGTCG
CTGGACATCA GTGAGGATGA GATCCGCTTC GGCCTCGGCG GGCGTCCCTT CTGGCGGACT
GTCCAGGAAT ACGATCAGGT GGCGACGGCC AAGGAACTCG ACGTGCCCCT CGCCATTTTC
CAGGGCGAGC GTGATTACCA GGTCACGGTC GAGAATGGAT ACAACCAGTG GCAGCAGGCC
CTCGGTGACC GGGAGAACGT CACCTTCCGG TCCTACGCCG ACCTGAACCA TCTCTTCATG
CCGGGCGAGG GCCAGCCGTC ACCGGCCGAG TACTTCCAGC CGAACAACGT CTCCCGCGCA
GTCGTCGAGG ACGTTGCGTC GTGGGTGCGA CGGGTGACGG GCGAGGACAA TCAGTAG
|
|---|
| Protein sequence | MRTRRRFLQT CIALSGASLA GCSEDDESTT PTSTTTTAVS TTASTPETDT ATPEPSESTA
TDEPTETTEP TETESIDPET LKETGRAFVN QLAAGEYAAI MDDYAFSEQF AAQVDAEQLE
SIWTTQTASL GQFVELAGAE YSRSDGYHVT VVLARFTGGR QAVRLVFDDT ATIVGLFFPA
SGGSYSPPEY VNQSAFEEVD RTIAATETCS LPAKLTLPTG EESIPGVVLV HGSGPNDMDE
TLGPNKPFKD LAWGLASRGV AVLRYDKRTH ACDVDRAALT LDEKVTDDAL TALGVLREHP
RIDPSRTVVV GHSIGAMTAP RIADRDGSVA GAVMLAGNAR PLLDVIPEQQ EYLFRLDGEL
SDEEATQLQA VEQTVERIRS LDISEDEIRF GLGGRPFWRT VQEYDQVATA KELDVPLAIF
QGERDYQVTV ENGYNQWQQA LGDRENVTFR SYADLNHLFM PGEGQPSPAE YFQPNNVSRA
VVEDVASWVR RVTGEDNQ
|
|---|
| |