| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_2730 |
|---|
| Symbol | |
|---|
| ID | 8385035 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhabdus utahensis DSM 12940 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013158 |
|---|
| Strand | + |
|---|
| Start bp | 2796709 |
|---|
| End bp | 2798886 |
|---|
| Gene Length | 2178 bp |
|---|
| Protein Length | 725 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 644973804 |
|---|
| Product | amino acid permease-associated region |
|---|
| Protein accession | YP_003131624 |
|---|
| Protein GI | 257053791 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0531] Amino acid transporters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.207919 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGAAGG AACTCGAACG CGATCTCGGA CTGTTTTCGG TGCTGGCGAT CAGTATCGGT
GCGATGGTCG GCAGTGGCAT CTTCATCCTG CCGGCGCTCG CCCTCGAGAT GGCCGGACCG
GCGGTGATCC TGGCGTACGT TCTGGCAGCA CTGATCGTCC TCCCGGCAGC ACTGAGCAAG
GCCGAGATGG CGACGGCGAT GCCCGAGGCC GGCGGGACCT ACCTCTACAT CGAACGGGGG
ATGGGACCGT TGCTCGGGAC CATCGCGGGT ATCGGGACCT GGTTCGCGCT CTCGTTTAAG
GGCGCGCTCG CGCTCGTTGG CGGCGTCCCG TACCTCTTGT GGTACTTCGA ACTCCCGATC
AAGCCGGTCG CGCTCGTGCT CGCGGCCGTC CTCATCCTGG TCAACCTCCT GGGCGCGAAA
CAGACGGGTC GCCTGCAGGT CGGGATCGTG GCGATCATGC TGGCCGCGAT GATCTGGTTC
GTCGGCGGCA GTGCGGGTTC GATCCAGAGC GCCTCCTTTG ATGGATTCCT GGCCTCGGGT
GCGGGCGGCA TCCTCGAAGC GACCGGCTTC GTGTTCGTCT CCTATGCGGG GGTGACGAAG
ATCGCGAGCG TCGCCGAGGA GATCGAGGAT CCTGATCGGG TGATACCCCG GGGGATGATC
TGGTCGCTCG GGTTCACGAC GCTGCTGTAC GTCCTCGTCG TGATCGTGAT CGTCGGCGTC
GATCCGTCGG GGATCGTCGG CTCGAACACC CCCGTCGCCG ACGTGGCCGA AGCGACGATG
TCGACGCCCG GCGTGGCCGC CGTCGTCATC GCTGCAATGC TCGCGCTGAT CAGTACCGCC
AACGCCGGCC TCCTCTCGTC GTCGCGGTAC CCCTTCGCGA TGAGCCGCGA CGACCTCGCG
CCGCCGACGT TCGCGGCCGT CAGTGACCGC TTTGGAACAC CGGTCACAGC AATCGCACTG
ACGGGTCTCG TCATGCTGGC ACTGATCGCG TTCGTCCCGA TCATGAGCAT CGCCAAACTC
GCGAGTGCGT TCCAGATCCT CGTGTTCGTG TTGATCAACG TGGCCCTGAT CGCCTTCAGG
GAGAGTGACA TCGCCTACGA CCCGAGTTAC AAATCGCCGC TGTATCCCTG GATGCAGGGC
TTTGGCGTCC TGGGCGGCCT CGTGTTGCTG ACCCAGATGG GACTGATCCC GTTCGTGGGG
GCGATCGTCA TCATTCTCGG GAGCGTCGGC TGGTACTTCG CGTACGCCCA CCGCAACGTC
TCCCGGGAGG GCGCACTCAC GGACGCGATC CGTCGCGGCA TGGATCGACG CGCCGTCGAT
GAGACCCGAT CGGTCTGTCA CGACGCCGAC GAGTCCGACG TGCTCGTGGC GCTCACCGAG
GACACGACCG CGGCGGCAGA GGAACGACTC CTCGACGTGG CGATTCCGAT CGCTCGCGCC
CGGGACGGGA CGGTCACTGT CGTCCAGTTC GATCAGGTGC CGGACCAGAC GCCATTGTCC
TACGCCGAGT CGACCCTCTC GACGGCCGAC AAAGCCTTCG AGGAACGGAC GGCTGCGCTC
GCCCGGGACG CGAGTGTCCC CGTCGAGTAC GGCGAGATCG TCAGCCACGA CATCGATCGG
GCGGTCGAGA ACGTCGCCGA CCTCCACGGC TACGACTTGG TCGTCGTCGA CGAGTCCGGC
CCGACCTTCA GCGAGAACCT TTCGGACGTC ATCTTCGGAC CGACCCGCTC GTTTGACGTT
CTGGGCGTCG AGGCAGAGAG CCTGGATGAC ATCGACCGGA TCGCGCTGGT CGACGACGGC
GGGCCGTTCG ATCCCGAAAA AGTCCGGATT GCGAACCTGC TCGCGACGGC CAACGATGCG
ACGATCGAAC TCGTCCACGG GATCGAGCCG GACGCGACGC CGGAACGGCG TGATTCGGTC
GATCGGTACC ACGCCGAGTT GGCGGATCTC TGCTCGGCCC CGACCGAGTC GGCGATCGTC
GAGGGTGACG ACACAGCCGC GCTGGTCCGT GCGACGGACG ACGCCGACGT CGTCGTTGTT
GCTGACACCG TGGGCGCAGT GCTCCGGGAT GGTCCGGGAG ACGCCGTCGC GAAACGCGGG
AACGCCCTCG TGTTGCATCC GGGAAGCGAC GGACAACCCG GGCTGATCGG TCGGCTCGTT
CAGCGCGTCG TGTACTGA
|
|---|
| Protein sequence | MPKELERDLG LFSVLAISIG AMVGSGIFIL PALALEMAGP AVILAYVLAA LIVLPAALSK
AEMATAMPEA GGTYLYIERG MGPLLGTIAG IGTWFALSFK GALALVGGVP YLLWYFELPI
KPVALVLAAV LILVNLLGAK QTGRLQVGIV AIMLAAMIWF VGGSAGSIQS ASFDGFLASG
AGGILEATGF VFVSYAGVTK IASVAEEIED PDRVIPRGMI WSLGFTTLLY VLVVIVIVGV
DPSGIVGSNT PVADVAEATM STPGVAAVVI AAMLALISTA NAGLLSSSRY PFAMSRDDLA
PPTFAAVSDR FGTPVTAIAL TGLVMLALIA FVPIMSIAKL ASAFQILVFV LINVALIAFR
ESDIAYDPSY KSPLYPWMQG FGVLGGLVLL TQMGLIPFVG AIVIILGSVG WYFAYAHRNV
SREGALTDAI RRGMDRRAVD ETRSVCHDAD ESDVLVALTE DTTAAAEERL LDVAIPIARA
RDGTVTVVQF DQVPDQTPLS YAESTLSTAD KAFEERTAAL ARDASVPVEY GEIVSHDIDR
AVENVADLHG YDLVVVDESG PTFSENLSDV IFGPTRSFDV LGVEAESLDD IDRIALVDDG
GPFDPEKVRI ANLLATANDA TIELVHGIEP DATPERRDSV DRYHAELADL CSAPTESAIV
EGDDTAALVR ATDDADVVVV ADTVGAVLRD GPGDAVAKRG NALVLHPGSD GQPGLIGRLV
QRVVY
|
|---|
| |