| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_2647 |
|---|
| Symbol | |
|---|
| ID | 8384952 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhabdus utahensis DSM 12940 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013158 |
|---|
| Strand | + |
|---|
| Start bp | 2718707 |
|---|
| End bp | 2723170 |
|---|
| Gene Length | 4464 bp |
|---|
| Protein Length | 1487 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 644973721 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003131541 |
|---|
| Protein GI | 257053708 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCGTCT CGATGTTGCC GGTAGGGACC GTCTCTGCTG GGACAGTCAC CGAAACCGCG
GGGAACACAG CGTCGGCTGA TACTGTCCCC GAGGTCTCCA TGGACGGGCC GCCGGTGGTG
TTGAAAGCCC AGGCCATGGA ACGGATCGGG AACCTCTCGG CTCCCTCGAA CCGTCTTGCA
TCCGCCAGGG ATCGCGCCCG AGCACGCGTG AACGATTCCT TTGCGTATTA CCAGGGGCCG
AGACGCGTCA GCGACCAGCA ACTTTTCGTT GACGACGCCG TCGCGCTACG GGCGCTGGCT
GCCTTCGACG GGACGAATCA AAGCAAGCGA ATCGGGCAGA TCGTCGAGTT GGTAGCGCGA
GCGGATAATC AGTCTGCCAG GCAAGTCATC CGTGATGCTG AATCCGCATT CAAGGCGACT
GAAGCGGACC TCGGCCCAGG AATGACACAT AGTGCTGCGG CGCACATCGA CAATGCTCGG
CGACAACTCA ACCGTGCCGA ACGGATTCGT GACCGTGCAG CGGATAACTC GGGTGCCCAG
TCCATCCGGA CGACGGCACG TGCCGTCCGG ACGTACGGCA CGGCGCTCAA CCAGGCACGG
ACTGCCTTGG GATTGATCGG TGGCGAGATT GGCCCGGAGG TGACGCTCAC CCGACGGACG
GATCCGGTCC GCAATGGAAG CGAACGAGCG CGCTATACGC TTGTGGGACA GGTCTCGGAT
CCGACCGGGC TAGACGCGGT GAACGTCACT GCGACGATCA ACGATGATCG GACAGTCGAC
CTTCCGCTTC GCCGTGGCTA CGCCAACGCC ACCTTCGCGA AAACGATCAA TCTCACCGCC
CGTGTGAATA CGATCGAAAT CTTGGCCGTC GAAAGTACCG ACAACCAACA GTCGAACAAC
GGCAAGCAGA AATCCAAGCA GAAGGGCAAA AAGAAGGGCA AAAAGAAGGG CAACAACGGC
AACGGTGGCC AGTCATCCGG GCAGAGCCAG GCGAGCACGG TCGTGCTTCG CCTGGACGGT
GACGGCCTGC CCGATACCTA CGAGAAGAAA GTGACGGGCA CGGATCCGCT GGATCCCGAT
AGTGACGCGC TCTCGACTGA CGTGAACGAG GCCGACAATG GCACGATCGA CGGCCACGAG
GATTTCGACG GCGATCGTCT GTCAACGATC CGAGAACGCG AACTTGGGAC GGATCCACTC
GAGGCTGATA CTGATGGTGA TGGCCTCCCC GATGGCTACG AGCGTTTCGG GACCGGAACG
GATCCACTCG ATATTGACAC GGACGGCGAT GGCACTTCCG ATGGTGCGGA AGACCTTGAC
GGAGACGGGT TGACCAACAC TGAAGAGTAC GACGCTGAGA CCTCACCACA GTACGCCGAC
ATCGACGGTG ACGGGTTGAC CGATCCCCAG GAACTCGCCA ACGGGACGGA TCCGTGGCAG
GCCGACACTG ACGACGACGG CCTCGACGAT GGCGTCGAAC CGACCGACCC GTTCGGGACT
GATCCACTGG ACCCTGACAC CGATGATGAC GGTGTCGACG ATGGCAACGA GACCTACACG
ACCATGGCGG GAAACGAAAG TCTGGGGGTC GATGTCGAGT TGACTGGTCA GGGGAACGCT
GCAGCCGAAA CGACAGTGCA GGAACCGTCC GATGCAATGT TCTCCAAGCG GTTTGGTCCG
CCAAACGTCT CAGCATCTTC GTACGTGTCC ATCGAAACGC AAGCAGAGAT CAATAACGCG
ACGGTGCAGA TCGGCTATGA CGGGCGTAAC GTAACGAACG AATCGACACT CGGTGTCTAC
ACGTTTAACG AAACGAGGAA CACGTATCAA CCACTCCCCA GTACCGTGGA CCCCGCGAAC
GACACGGTGA CGGCACGAAC GGAGCATTTC TCGAAGTTCG TCGTCTTCAA TCGGTCAGCG
TGGCACGCAT TTCTCGACCG CCGCGCGGGG TATCCGGATG AAGATCTTGA ATTTGGCGTA
ATAAATGAGA CTTTTGACGA CCTCGATGAG TGGACCTGTT CGAATGTTCC ACGAGGATCG
GACGATTCCC ACCTCGATAC ACCGACGAAA GGCTTCTGTA AAATCGAAGA CGGCGCAGCG
AAAGTCCAAG AGGAGACGAA CCGAGCGAGG TTTCTCAATC GGACGGTTTC CTTACCCAGT
TCGCGGGTTC TCGATGGTCG ATCATTGCAT CTAAAGAGTT CACTACAGGC ACACGTCGAT
GCCCAGTGGT CAAACGCAGC AATCAATCTA TATATTTCGC CAGTCAGCGA GACTGGTGCC
GGGGCCAACT CCCAGCGGAT TTTCACATTG AGTAACGACG GCAGCAACGA AGACGAAACG
ATCGCTGCCG CACCAACCAT AGACATCAGC AAGTTCGCCG GCCAGCAAGT CCGTCTCTCA
ATCGAAGCAG ACGGACGGTG GACTTACCAG AACCAGAATA CGACGACGTG GATCAAAGCC
GACTACATCA ACATCAGTAC GGCGAAGGCG GCGGATGAAG ACACTGACGG TGACGGAATC
CCGGATAGCT TGGAGGAACG TGGCGTCCCA CTCTCGAACG GGGAGCGTGT CGACCTCATC
TGGCTTTCTA GCAAGAAAAA TTCCACCGAT GAACCGCTCG GCTACGATAC GGACAACGAC
GGGCTTGCAG ATGGCCAAGA AGTGTTGATC GACCAACCGG TGTACGCAGA CACGAGCCAT
CGAGGAAAGA CCTTCGTGGG CTACGAGTGG CGGAGCCATC CCAAGACAAA GTTTTCCGAT
GGGGATGGAT TGACAGATGG GATCGAGTAC AAGGGGTGGT CAATCGATAC GATCAACAAG
AGCGGTCAAG CATATCGCTG GGCGAACAGC ACCGAGCAAC CAGCGAATGG GACACTAGAA
GTCTCCTCAG ATCCCCAATC CAAGGATTCG GACGGTGATG GACTGACCGA TTTCGAGGAG
AAGAAATACA CATATACGGA TCCGCGGAGT TCTGTGACGT ATTCACTCTC TCAAGAAAGA
GCAGAATTAC TTGATGATGT ACGAATGCAC CGGGATAAAG AGTTCTTGAT GGATGTTCTA
GGTGTCTCTC CCCAGTTGGC TCGCGGTCGG ATCACAGCGC AACCGGGTAT CGTTGACGAC
GCCGGAACTG ATTTCGACTT CGTCGTCGAT GATTCGGTAC CCTCGGGCAT ATCCAAACCG
CAACGAATCC ACCGTGTGAC GCTCATCGGA CTCGATGGCA AGAATCAGAC GGATATTTGG
ATGTCGAACG AGGAAGAAAT CAGCTGGACG GCACCTTCAG GATGGGACGC AGAAAAACCG
CTTGACCCGT GGGATCCTGA CACCGATGAC GATGGCCTGA CCGACGGTCA GGAAGTGCAT
GGCTGCTCCG TGGTCACTGG CGGGTGGAAT GACCATCAGT ATACCTGGGA TCGGATTTAC
AACCCGTCGA ATCCAAGTGA TCCTGACACG GACGACGACG GTTACTGGGA CGGCTTCATT
GGCGTCCACG GTGTCGGGTA TTCGGACAAG GTGATTCTGT ATCGGGAACA CTTACACGAT
AGTGATTCAG GTGTCCCAGC ACCGAGCGGG GTTCGCGGGG ATGAAACGGT CCCTGAGCAG
GCGTTACTGC ACGAGGTATC CGGAGAGACG CCGGGCGCTA ATATCTACGA TAATGAGACT
CGGTATCACT CGAAGGTTCA CGTCGGTGAG TTGCATTGGG GCACGTCGCC GACTGACGAA
CACAGCGAAC CCGACACGTC CTGGACGATT GAAGTGGATT TCTACGATGG GATCCAACAC
GAGGCGATCA ACACGTCAAC GTGGGAAAAC GGTATTGAGC AGAACATGCA GTTGTACGGT
CTGGACGTGG ATCTGATCCG TGACGAAACG ATAACCGACC AGATGTTTCG TAACAGTACA
GATGAGGAAC GGAGAGGCAT GCCAGATCAG GAACTAACCG ATGGAATCTC ATATACACTC
CCGGAAGGGG GCAAGGAGTT AGAAACGACA TACGGCAATT TCAGCAAATC ACGACAGTAT
ATCGACGAAT GGCTTCTCGT TGGCCCGAAT ATACAAAACA AACTACAGCC ACGTCCCTTT
TACGGAGGGA ACCCCATCGG ACCGACGATG GCCGTACATG TGACAGATCT CCAATCACTC
CGCTCTAATA TTTCGGTGCC AGTCCAGCAC TCACCCTATC AAGCCGAACT GGCCATGCTG
ACGGCCGATA CCACAATGCA CGAAATCGCC CATACGTATT GTGTGGGTCT CGCCGACGAT
GAGGGTGTGG ACATGAACAA GTGCCTGATG GAGAATGAAA CCTACAGTGG AAGCAACGCG
GATGAAACGC CGGAATACAT TTGGAATGAA AAGGAGCGAT CGTTGATGAG TGCCATTTCC
GAAGAGAAGT TTGGGCAACC GATGAACGGT GAATATTCGA TCTTCAGCAT TCAGGAGTTG
CTAACGATCC ATGAACCTGA ATAA
|
|---|
| Protein sequence | MIVSMLPVGT VSAGTVTETA GNTASADTVP EVSMDGPPVV LKAQAMERIG NLSAPSNRLA
SARDRARARV NDSFAYYQGP RRVSDQQLFV DDAVALRALA AFDGTNQSKR IGQIVELVAR
ADNQSARQVI RDAESAFKAT EADLGPGMTH SAAAHIDNAR RQLNRAERIR DRAADNSGAQ
SIRTTARAVR TYGTALNQAR TALGLIGGEI GPEVTLTRRT DPVRNGSERA RYTLVGQVSD
PTGLDAVNVT ATINDDRTVD LPLRRGYANA TFAKTINLTA RVNTIEILAV ESTDNQQSNN
GKQKSKQKGK KKGKKKGNNG NGGQSSGQSQ ASTVVLRLDG DGLPDTYEKK VTGTDPLDPD
SDALSTDVNE ADNGTIDGHE DFDGDRLSTI RERELGTDPL EADTDGDGLP DGYERFGTGT
DPLDIDTDGD GTSDGAEDLD GDGLTNTEEY DAETSPQYAD IDGDGLTDPQ ELANGTDPWQ
ADTDDDGLDD GVEPTDPFGT DPLDPDTDDD GVDDGNETYT TMAGNESLGV DVELTGQGNA
AAETTVQEPS DAMFSKRFGP PNVSASSYVS IETQAEINNA TVQIGYDGRN VTNESTLGVY
TFNETRNTYQ PLPSTVDPAN DTVTARTEHF SKFVVFNRSA WHAFLDRRAG YPDEDLEFGV
INETFDDLDE WTCSNVPRGS DDSHLDTPTK GFCKIEDGAA KVQEETNRAR FLNRTVSLPS
SRVLDGRSLH LKSSLQAHVD AQWSNAAINL YISPVSETGA GANSQRIFTL SNDGSNEDET
IAAAPTIDIS KFAGQQVRLS IEADGRWTYQ NQNTTTWIKA DYINISTAKA ADEDTDGDGI
PDSLEERGVP LSNGERVDLI WLSSKKNSTD EPLGYDTDND GLADGQEVLI DQPVYADTSH
RGKTFVGYEW RSHPKTKFSD GDGLTDGIEY KGWSIDTINK SGQAYRWANS TEQPANGTLE
VSSDPQSKDS DGDGLTDFEE KKYTYTDPRS SVTYSLSQER AELLDDVRMH RDKEFLMDVL
GVSPQLARGR ITAQPGIVDD AGTDFDFVVD DSVPSGISKP QRIHRVTLIG LDGKNQTDIW
MSNEEEISWT APSGWDAEKP LDPWDPDTDD DGLTDGQEVH GCSVVTGGWN DHQYTWDRIY
NPSNPSDPDT DDDGYWDGFI GVHGVGYSDK VILYREHLHD SDSGVPAPSG VRGDETVPEQ
ALLHEVSGET PGANIYDNET RYHSKVHVGE LHWGTSPTDE HSEPDTSWTI EVDFYDGIQH
EAINTSTWEN GIEQNMQLYG LDVDLIRDET ITDQMFRNST DEERRGMPDQ ELTDGISYTL
PEGGKELETT YGNFSKSRQY IDEWLLVGPN IQNKLQPRPF YGGNPIGPTM AVHVTDLQSL
RSNISVPVQH SPYQAELAML TADTTMHEIA HTYCVGLADD EGVDMNKCLM ENETYSGSNA
DETPEYIWNE KERSLMSAIS EEKFGQPMNG EYSIFSIQEL LTIHEPE
|
|---|
| |