| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_2594 |
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| Symbol | |
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| ID | 8384899 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhabdus utahensis DSM 12940 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013158 |
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| Strand | - |
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| Start bp | 2658234 |
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| End bp | 2659415 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644973669 |
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| Product | lycopene cyclase domain protein |
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| Protein accession | YP_003131489 |
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| Protein GI | 257053656 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03462] lycopene cyclase domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00913111 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGATCG CCCGTCACCG TCCCGGTCCA GCGGCGGCAG TCCGTGCGCT GGTGTCCCAG
GTCCATCCGG TGTTCATGCT GCCGCCGGTG GCCGTCTCAT TGACGGGCTC ACTACTCGCT
GCCAGAGCGA CGGGATCGTT CACTCCCACA GTCGTCGCGG CCCACGCAAT AGCGATCTTC
GCAGCGGTCT ACACCGCCCA CGTCAAGGAT GGCTACGTCG ACTTCTTCGT CCGGAGCGAG
GACGAGGATC ATCCGCTGTC GGTGGGTGGC TGTCGGATTG CACTGGCCGG TGCCGGGACC
CTCTTCGCGG TGGCGCTGAC CGGCGTCGCC CTGACTGGTG GGCCGGAAGC CGCCGCGCTG
ACCGCACCGA CGTGGGCGCT CGGGTACTTC CACGCGCCGC AACTGGATAC GAATCCGGTC
ACGGCGACCG GGGGCTATCC GGCCGGGATC GCGCTGTCGC TGGTGGGTGC GTACGTCGCC
GGGGCCGGCA CGGTGACCCC GACTGTCCTC GGACTGGCTG GCGTGTTGCT CGCCGTCCTC
CTGGGGATCA AGATCATCGA CGACGCCCAG GATCTGACGT ACGACCGCTC GATCGGAAAG
CGAACGGTCG CCGTCGTCCT GGGGCCGCGT CGAGCGCGCC AACTGGCGGA GGGGCTGCTC
GCTGTCGGGC TCGCTGGGGT AGCCGTCCTG GCCGCCGTCG GTGTGTTTCC GACGGGGACG
GTACTGGCCG TCTTCGCGTT CGGCGCGGTG GCCGCGGTTG GACGGCGGGC CGAGCCACGA
CTGGCCACGA TGTTGCTTGT CCGCGGGGCG TACGTCTTCC TCGCCCTCCT GTTGATCGCG
CTTTGGTATC GACCGATGAC CGGTCCGCTG CCCGTCGACA TCGGCGTGCT CGGTCCCTAC
ACCTACCTCG CGACGGAGGT CGCGTTCGGC GCGCTCGCGC TGACGTTGCT CGTCCGGGCC
GAGGCACTCA CGCGGGCAGC ACGGACGATC GTTGTCCTCT ACCCACTGGC GTACGTCTGG
GACTGGTACA CCCTCGAGGT GGGTGTCTTC GCCATCGAAC TGCGGACTGG GGTCGACCTG
CTCGCCATCC CGATCGAGGA GCACCTGTTC ATGCTCGTCG TTCCCGCACT GGTACTCGGC
ATCCACGAGA CGCTCACGCA ACGGCGCTCC AGACAGAAGT GA
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| Protein sequence | MSIARHRPGP AAAVRALVSQ VHPVFMLPPV AVSLTGSLLA ARATGSFTPT VVAAHAIAIF
AAVYTAHVKD GYVDFFVRSE DEDHPLSVGG CRIALAGAGT LFAVALTGVA LTGGPEAAAL
TAPTWALGYF HAPQLDTNPV TATGGYPAGI ALSLVGAYVA GAGTVTPTVL GLAGVLLAVL
LGIKIIDDAQ DLTYDRSIGK RTVAVVLGPR RARQLAEGLL AVGLAGVAVL AAVGVFPTGT
VLAVFAFGAV AAVGRRAEPR LATMLLVRGA YVFLALLLIA LWYRPMTGPL PVDIGVLGPY
TYLATEVAFG ALALTLLVRA EALTRAARTI VVLYPLAYVW DWYTLEVGVF AIELRTGVDL
LAIPIEEHLF MLVVPALVLG IHETLTQRRS RQK
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