Gene Huta_2586 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_2586 
Symbol 
ID8384891 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand
Start bp2651668 
End bp2652678 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content58% 
IMG OID644973661 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_003131481 
Protein GI257053648 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.63253 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTAAACT ACTACGTCAA ACGGACGGCG AAGGCGATTG TGACGATCTA TGTCGTCATC 
ACCCTGAGCT TCGGCCTCAC CCGAATGCTT CCCGGCAATC CAGCGGACAG AATCAGAGGG
CGACTCTCAT CGATAGGGTA TACACAGGAA CAGATCGAAA TCGTCATATC CAACCTCGGA
TACAACCCGG ATGTACCGCT CCCGCAAAAG TACCTCGACT ACCTCGTTGG CTTACACCAG
GGAAGCCTGG GTTCGTCGAT TCAGGTCGCG GGTGGTGGCA CCCCCGTCAC AGAGATCATG
GCGACCCGCC TCCCGTGGAC GATCCTGATC ACCTTGGTCT CGATCGTCCT CTTCTTCGCG
ATCTCGATCA CGCTCGGCGC GATCATGGCC TACCGTGAAG GGTCGCGTTT CGACACCGCC
AATTCGGCGC TCGCGATCTT CGCCAGTGGG ATCCCCTTCT TCGTCATGGC GATCATCCTG
GTGTTCATCT TCGCGCAGAC TCTCGGGTGG TTCCCGACCG GACGGCGATA CTCGCTCAAC
GTGGACCCAG GCTTCAACCT GGCATTTCTC CACAGCGTGA TCTTTCACTC GACGCTTCCG
ATCGCGTCGA TCGTCATTTC GCGATATGGC GTTCGCGCGC TCGCGATGCG TGGAAACAGT
ATCTCCATTC TCGGGAAGGG CTACGTCGAG GTCGCAAAAC TACGAGGTCT CCCCGACCGC
ATCATCGCGC TCCGGTATGT CGGCCGCAAC GCCGTGTTGC CGATGTACAC CGGGATGTTG
CTGTCGTTCG GGTGGGTCCT CGGCGGGACG ATCGTCCTCG AACAGGTGTT CAATTACAAG
GGACTCGGCT GGATGTTGTT CCAGGCGTAC GACTATCGCG ACTACCCCGT TTTGATGGGG
GCGTTCCTGG TAATTACCCT GTCGCTAGTG GTCGGCATAT TCCTGGCTGA CCTCTCGTAT
GGGTTCGTGG ATCCGCGGAT CAAGACGGGT GATGAAAGTG AGTCATTCTG A
 
Protein sequence
MVNYYVKRTA KAIVTIYVVI TLSFGLTRML PGNPADRIRG RLSSIGYTQE QIEIVISNLG 
YNPDVPLPQK YLDYLVGLHQ GSLGSSIQVA GGGTPVTEIM ATRLPWTILI TLVSIVLFFA
ISITLGAIMA YREGSRFDTA NSALAIFASG IPFFVMAIIL VFIFAQTLGW FPTGRRYSLN
VDPGFNLAFL HSVIFHSTLP IASIVISRYG VRALAMRGNS ISILGKGYVE VAKLRGLPDR
IIALRYVGRN AVLPMYTGML LSFGWVLGGT IVLEQVFNYK GLGWMLFQAY DYRDYPVLMG
AFLVITLSLV VGIFLADLSY GFVDPRIKTG DESESF