Gene Huta_2585 details

Gene Information

• Locus tag: Huta_2585
• ID: 8384890
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halorhabdus utahensis DSM 12940
• Kingdom: Archaea
• Replicon accession: NC_013158
• Strand: +
• Start bp: 2649797
• End bp: 2651608
• Gene Length: 1812 bp
• Protein Length: 603 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 644973660
• Product: extracellular solute-binding protein family 5
• Protein accession: YP_003131480
• Protein GI: 257053647
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0747] ABC-type dipeptide transport system, periplasmic component
• TIGRFAM ID: [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTAGTG AACAGTCTTC AGGGAGTTTC GAGGACGTAG TGAATCGCCG CAACTTCATG 
CGGCTGGCAG GCGCGACCGG CGCGACCATG CTTGCCGGGT GTCAAGGTGA GGAGACAGAC 
ACGGAAACGG AGAGCGGTGG AAACGGTGAC ACCGAGACGG ACAGCGGTGG CGACACCGAC 
GTCTACGACG TCACGGTCGA ATCCGCTGCC GCCCGTGGGA TGGACCTGCT CGACTGGAAC 
GCCCAGTTCG CCGGGTGGCC GAACATCTGG GGGCGCTGGC TCGCTTACGA GCGCTATGCC 
CAGTACAACA TGACGGAAAA CGAGTGGATC CCCCGGCTCA TCCAGGACTG GTCGGTCGAC 
GGGACGACTG TCACCCTCAA CATCCGTGAG GATCACACCT ACGCGAACGG CGACCAGGTG 
ACGGCCGACG ACATCAAGGC GAACACCGTG ATGAACCTCG CGACGGGGGC CGCGTTCGCG 
GATGTCTTCG ACTCGTTCAA CGCACCTGAC GACAAGACGC TCGAGATCGA GACCACAAAG 
GAAGTCAATC CGGATATCCT CGAGTTCACG CTCCTCTCCC AGCTCCAGCA GGCGAAGATG 
GCCGAGCCCT ACGACGAGCT CTATCAGCGC TACTGGGAGG ACGAGGAGGA GGGCGTCTCC 
AGCGACATTC AGGGTCGTGA GCCCAATTCG CCCGACTACG TCTCCGGGAT CTTCGGGCAG 
CAGAGCAAGG ACGACGAGCA GTACATGATG AACCGTAACC CCGAGCACCC TGACGCCGGG 
AACGTCAACT TCGAGCGTTA CCGGTTCCCG AACTACCCGG GCAACGAGGG TAATTGGGAA 
GCCATGATCG GTGACGATAT TGACACGATC ATGAGCGCGT TTACTCCGTC GAACATCCGG 
GCGGAGCTTG CCGACCACTG GCAGGAATAC AACTTCCCCG GCTACTGGGG TGTCGGCTAC 
GTGTTCAACC ACGACGAGGA AGCCGCGCCG CACATCTCGA AGCGATCGGT CCGACAGGCG 
ATCACGCACG CCATCAACCG GGAGGACGTC GTCACGGCCG CGGGCGCAGA GATCAAGGAG 
GCCTTCCCCA CTCCGGCCGC CGTCTCCGCG AACGTCCAGG ACGAGTGGCT CGACGTGGGT 
GGCCAGTTCC CCGCGATGCA GGGTGGCGCA GAGCAGGCCG CCGAGATCAT GCAGGACGCC 
GGCTACGAGA AGAACGGCAA CGGCAACTGG GCCATGGACG GCGAGACCGT CACGTTCCAG 
GTCGTCGTCC CGAGTAGCTG GAGTGACTGG GTCACGGCGA CCCAGGCTGT GGTCCCACAG 
CTCCAGGACG CCGGGTTCGA CGCGGAGATG AACCGTGTCG ACAACATCAA CACGGTCGTC 
GGAGAAGGGA ACTTCAAGAT GGCGGCCCGT CCGTGGTCGC CCGGCAACGC CCGCTCCTCG 
CACCCGTACT TCCCACTGAA CTGGGTCTTC GGGCGCGCGT ACAACAACGC CCACAGCTAC 
CCGGGTGCCG AGGCTGGCAC CGAGATCGAG GTTCCGGCGA TGGACGGAGA CGGTACCATG 
TCGGTCGACG TCCAGCAGCG CCTCGACGAC CTCTCGACCT CGAGCGGCGA GGAAGCCCAG 
TCCATCGTTC AGGAGCTCGC GTGGGTCTCC CACCAGGACC TCCCGTACCT GCCGATGATC 
AACAAGGTAG AGCAGTCGTG GATCAGTACG CGGCGGCTGT CGGCTCCCGA AACTGACGAC 
CCAGCAGGCA ACGTCAAGTG GCCGACGTTC TACGCCCCGC GTGTCGGAAA GATGCAGTGG 
CAGGGCGAGT AA 

 

Protein sequence

MASEQSSGSF EDVVNRRNFM RLAGATGATM LAGCQGEETD TETESGGNGD TETDSGGDTD 
VYDVTVESAA ARGMDLLDWN AQFAGWPNIW GRWLAYERYA QYNMTENEWI PRLIQDWSVD 
GTTVTLNIRE DHTYANGDQV TADDIKANTV MNLATGAAFA DVFDSFNAPD DKTLEIETTK 
EVNPDILEFT LLSQLQQAKM AEPYDELYQR YWEDEEEGVS SDIQGREPNS PDYVSGIFGQ 
QSKDDEQYMM NRNPEHPDAG NVNFERYRFP NYPGNEGNWE AMIGDDIDTI MSAFTPSNIR 
AELADHWQEY NFPGYWGVGY VFNHDEEAAP HISKRSVRQA ITHAINREDV VTAAGAEIKE 
AFPTPAAVSA NVQDEWLDVG GQFPAMQGGA EQAAEIMQDA GYEKNGNGNW AMDGETVTFQ 
VVVPSSWSDW VTATQAVVPQ LQDAGFDAEM NRVDNINTVV GEGNFKMAAR PWSPGNARSS 
HPYFPLNWVF GRAYNNAHSY PGAEAGTEIE VPAMDGDGTM SVDVQQRLDD LSTSSGEEAQ 
SIVQELAWVS HQDLPYLPMI NKVEQSWIST RRLSAPETDD PAGNVKWPTF YAPRVGKMQW 
QGE