| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_2559 |
|---|
| Symbol | |
|---|
| ID | 8384864 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhabdus utahensis DSM 12940 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013158 |
|---|
| Strand | + |
|---|
| Start bp | 2625061 |
|---|
| End bp | 2625738 |
|---|
| Gene Length | 678 bp |
|---|
| Protein Length | 225 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 644973636 |
|---|
| Product | protein-L-isoaspartate O-methyltransferase |
|---|
| Protein accession | YP_003131456 |
|---|
| Protein GI | 257053623 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG2518] Protein-L-isoaspartate carboxylmethyltransferase |
|---|
| TIGRFAM ID | [TIGR00080] protein-L-isoaspartate(D-aspartate) O-methyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.164869 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGCTGGT GGGACTCCGG CGGTGAGGGG TCCGGTGATG GCGAGAGCGG TTTCGAGCGC
CAGCGCGACG AGTTGATCGA GCAACTCCGA AAGCGCGAGC GCGTCAGCGA GCGTGCGCTC
GATGCCCTGG CTGCCGTCCC TCGCCACGAG TTCGTCCCCG AAAGCAAACG TCGACACGCC
TACGCCGACC GGCCGCTGCC GATCGGCGAG GGCCAGACCA TCAGTGCGCC GCACATGGTG
GCCATCATGG TCGACTGCCT CGAACTCGAA CCCGGCCAGG CGGTACTGGA GATCGGTACC
GGCTGTGGGT ATCATGCGGC CGTCACCGCC GAGGTCGTGG GCGGGGAGAA CGTCTACAGC
GTCGAGTACC ATTCCTCACT GGCCGAGCGC GCGCGTGATC GACTCGCCAA ACTCGGCTAT
GGGGACATCT CGATCACTGT CGGTGACGGC CACGACGGCT GGCCCGAACA CGCGCCCTAC
GACCGGGCGT ACCTGACCGC GGCGGCCAGT GCAGTGCCGG ACGCGCTTCT CGATCAGCTT
CGACCGGGCG GAATCTTCCT CGGGCCGATC GGCGACCGTC GCCAGACGCT CGTCCGGATT
CAGAAACGTC CGGATGGCTC GACCGAACGC GAGACCTTCG GCGGTGTGCG CTTCGTTCAG
ATGCAAGGCG GGACGTAG
|
|---|
| Protein sequence | MGWWDSGGEG SGDGESGFER QRDELIEQLR KRERVSERAL DALAAVPRHE FVPESKRRHA
YADRPLPIGE GQTISAPHMV AIMVDCLELE PGQAVLEIGT GCGYHAAVTA EVVGGENVYS
VEYHSSLAER ARDRLAKLGY GDISITVGDG HDGWPEHAPY DRAYLTAAAS AVPDALLDQL
RPGGIFLGPI GDRRQTLVRI QKRPDGSTER ETFGGVRFVQ MQGGT
|
|---|
| |