| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_2553 |
|---|
| Symbol | |
|---|
| ID | 8384858 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhabdus utahensis DSM 12940 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013158 |
|---|
| Strand | + |
|---|
| Start bp | 2619271 |
|---|
| End bp | 2621859 |
|---|
| Gene Length | 2589 bp |
|---|
| Protein Length | 862 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 644973630 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003131450 |
|---|
| Protein GI | 257053617 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1033] Predicted exporters of the RND superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.531881 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAGGGA AGCTATCTCG CCGGTACGCG GATTGGATCG CCACTCACAG CAAACTCGTC
GTCCTCGCCG TCCTGGCACT GACGATCCTC GTCGCGGCTG GGACGACGGT CGGCGAAACG
GGGAGTGCCG GCGTCGGCCA GTTCCAGGTC GACACCGCAG AGACCGACGC CGCCGCGTTC
GTCCGGGAGA ACTACGGGGG CAACGAGGGG ATCGCCGCAC AGCTCGTCGT TCGCGACGAG
GGCGGGGACG TTCTCACGAG AGACTCGTTG CTCGAGGGAC TTCGATTGCA GCAGACCGTC
AGAACCGACG ACTCGATCAG CGAAACGCTC GCCGAGCCAG GACTGATCGG CATCGAGAAC
CTCGTCGGGA CGGCTGCCGT CTACGCCGAC GCGACCGCCG ACGGTGGACC GCCGCCCGCC
AAGCCGCCGT CGCTGTCCGA ACAGATCGCG GCTCTCGAAG ATCGGACCGA CACACAAGTC
AAACAGCTGC TCGCCCGGGT GCTCGATCCC GAGGGATCGT CGCTGACGGA ACGCGATCCC
TACGCGTTCC TGCCTCGCGA CTACGAACCG GGCGAGACCC GGGCCGAGGC TCGACTGACC
TTGATCAGCC AGGTCGACGC GAGTGGCGAG AATAGCGATC CGCAGGTGGC CTACGACGCC
CAGGTGGCGA TCGACAGAAT GGTCGAGGAC CGCTTCGCCG ACGCGTTCGT CTTCGGCCAG
GGCATCCAGG ACGACGCCTC CACGCGGGCC ACGGGCGACA GCTTCACGAT CATCACCCCC
TTTGCGCTCG CCCTGATCGT GCTGGTGCTG GGGATCACCT ACCGCGATGT CCTCGACATC
CTGCTTGCGT TCGTCGGGAT CGGGATCGTC CTGGCGTGGC TCGTGGGGCT GATGGGCTGG
CTCGCGATCC CGATGAACGT CATCCTGATC GCCGTTCCCT TCCTGTTGAT CGGGCTGAGT
ATCGACTACG CCCTCCACGT CGTGATGCGC TACCGGGAGG CCCGCGCGGG GACGCTTGAG
GCCGGTTCGT CGAGCGAGAC GACCGAAATC GGGAACCGAT CCATCCGGAC CGCGATGGCG
GTCGGCCTCG GCAGCGTCGT CCTAGCGCTC GCGGCGGCGA CTGTCTCGAC CGGTGTCGGC
TTCCTTTCGA ACGTCGTCAG TCCACTGCCG GCGATACGAG ACTTTGCAGT GCTGAGTGCC
GGCGGGATAT TCGCCACATT CGTCGCCTTC GGCGTCTTCC TGCCCGCGCT CAAGATCGAA
GTCGATTCGA TCGTCGAGAA CCGGCTCGGT CGGAGCCGGG CCAAACCAGC CTTCGGCGTC
GGTGGCGGGA GTGCGAACGC GGTCCTCGCG AAACTCGGCT CGGTCACCAT GCGCGCCCCC
GTGGTGATCG TCGTCGTGGC GCTCCTGCTG GGGACCGTCG GGGCCTACGG CGCGACGACC
ATCGACACGG AGTTCAACGA GGCCGACTTC CTGCCGACCG ACGCGCCGGA GTGGGCCAAG
TCGCTTCCTG GGCCACTCGC TCCCGACACC TACACTATCG CCGATGACTT CGCGTACCTC
AGCGACAACT TCCAGCTCCG CGGGGAGGGC GGCCAGTCAC AGGTGTTGAT ACGTGGGGAC
GGACTGGCCG AGGGGACACT CCTGTCGACA CTCGACGATG CGGCCGGGTC AGTCCCCGAA
GACAGCTCCA TCCAGCTCCG GCCGGACGGC CGGGCAGCAC TCGACGGTCC CCACACCGCG
ATCCGTGCAG TCGCAAGCGA CAATGCGACG TTCGCGTCGC TTGTCGAGCG CAACGACGCG
AACGACGACG GCCTGCCCGA CGAGAACGTC AATACGGTCT ACGCCGCGCT GTTCGACGCC
GACGAGGCGG CCGCCTCGCA GGTCCTGAGT CGGTCCGATG ACGGCAAGAT CACGTCGGCG
CGACTCGTGC TCTCGGTTCG CTCCAGCGAA TCGGCCCAGA CCATCGCCGA CGACACGCGG
ACGTTCGCCG AGGGGATCGA AGCCGAGACG ACCGAGATCA CTGCCGTCGC GACGGGCGCG
CCGGTCTCGA CCGCCGTGAT TCAGGACGCA CTGCTGGAGA CCCTGGTCGA AGCTTTCGCG
GTGACGCTGG TGGTTATCCT GGTGTTCGCC ACCGGGCTGT TCGGCCTGCG CTATGGGTCG
TGGTCGCTCG GCGCGCTGGT GCTCGCGCCC GTCGTGGTCT CGCTGGCGTG GCTGCTCGGC
GCGATGGCCG CGCTGGAAAT CTCCTTCAAC AGCGAGACGG CCGTCATCAC GAGCCTCGCG
ATCGGGCTGG GCGTGGACTA CAGCATCCAC GCTGGCGAGC GCTTCATGGC CGAACGGGCG
GAACGCGACA CCCTCACTGA GGCGCTCCGG CGGACGATCA CCGGCACCGG CGGGACCTTG
CTCGCGAGCG CGGCGACGAC GGCTGCGGCC TTCGGCGTCC TGGCATTCGC GCTGTCGCCA
CCGCTCCGGC GCTTCGGCAT CGTGACCGGG CTGGCGATCA TTTTCGCGTT CGTTGCCGTC
GTCACGATGT TGCCCGGCCT GCTCGTCCTC CGGGAACGAG TGGTTGCTAG CGGGCTGCGT
TCGGACTGA
|
|---|
| Protein sequence | MTGKLSRRYA DWIATHSKLV VLAVLALTIL VAAGTTVGET GSAGVGQFQV DTAETDAAAF
VRENYGGNEG IAAQLVVRDE GGDVLTRDSL LEGLRLQQTV RTDDSISETL AEPGLIGIEN
LVGTAAVYAD ATADGGPPPA KPPSLSEQIA ALEDRTDTQV KQLLARVLDP EGSSLTERDP
YAFLPRDYEP GETRAEARLT LISQVDASGE NSDPQVAYDA QVAIDRMVED RFADAFVFGQ
GIQDDASTRA TGDSFTIITP FALALIVLVL GITYRDVLDI LLAFVGIGIV LAWLVGLMGW
LAIPMNVILI AVPFLLIGLS IDYALHVVMR YREARAGTLE AGSSSETTEI GNRSIRTAMA
VGLGSVVLAL AAATVSTGVG FLSNVVSPLP AIRDFAVLSA GGIFATFVAF GVFLPALKIE
VDSIVENRLG RSRAKPAFGV GGGSANAVLA KLGSVTMRAP VVIVVVALLL GTVGAYGATT
IDTEFNEADF LPTDAPEWAK SLPGPLAPDT YTIADDFAYL SDNFQLRGEG GQSQVLIRGD
GLAEGTLLST LDDAAGSVPE DSSIQLRPDG RAALDGPHTA IRAVASDNAT FASLVERNDA
NDDGLPDENV NTVYAALFDA DEAAASQVLS RSDDGKITSA RLVLSVRSSE SAQTIADDTR
TFAEGIEAET TEITAVATGA PVSTAVIQDA LLETLVEAFA VTLVVILVFA TGLFGLRYGS
WSLGALVLAP VVVSLAWLLG AMAALEISFN SETAVITSLA IGLGVDYSIH AGERFMAERA
ERDTLTEALR RTITGTGGTL LASAATTAAA FGVLAFALSP PLRRFGIVTG LAIIFAFVAV
VTMLPGLLVL RERVVASGLR SD
|
|---|
| |