Gene Huta_2544 details

Gene Information

• Locus tag: Huta_2544
• Symbol: rpl10e
• ID: 8384849
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halorhabdus utahensis DSM 12940
• Kingdom: Archaea
• Replicon accession: NC_013158
• Strand: +
• Start bp: 2611295
• End bp: 2611825
• Gene Length: 531 bp
• Protein Length: 176 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 644973621
• Product: 50S ribosomal protein L10e
• Protein accession: YP_003131441
• Protein GI: 257053608
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0197] Ribosomal protein L16/L10E
• TIGRFAM ID: [TIGR00279] ribosomal protein L10.e

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.016395
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCGAGA AACCTGCGTC GATGTACCGT GACATCGACA AGCCGTCGTA TACCCGGCGC 
GAATATATCA CCGGCATCCC CGGCTCGAAG ATCGCACAGC ACCAGATGGG CGACACGAAC 
GCCGACCCCG AGGACTATCC TGTCCAGATC TCACTGGTCG TCGAGGAGAC TGTCCAGCTT 
CGGCACGGCT CGATGGAGGC CTCCCGGCTC TCGGCGAACC GACACCTGAT CAAGGAGCTC 
GGCGAGGGCA ACTACACGAT GACGCTGCGG AAGTTCCCCC ACCAGGTCAT CCGGGAGAAC 
AAACAGGCGA CCGGTGCGGG GGCCGACCGT GTGTCCGACG GGATGCGACA GTCCTTCGGC 
AAGATCGTCG GCACGGCCGC CCGCGTCCAG GCCGGCGAAC GACTGTTCAC CGCCTACTGT 
GACGTCGAGC AGGCCGAGGC CGTCAAGGAA GCCTTCCGAC GTGCGTACAA CAAGATCACG 
CCGCCCTGCC GGATCAAGGT CGAGCGCGGC GAAGAGCTCC TGATCGCCTG A 

 

Protein sequence

MSEKPASMYR DIDKPSYTRR EYITGIPGSK IAQHQMGDTN ADPEDYPVQI SLVVEETVQL 
RHGSMEASRL SANRHLIKEL GEGNYTMTLR KFPHQVIREN KQATGAGADR VSDGMRQSFG 
KIVGTAARVQ AGERLFTAYC DVEQAEAVKE AFRRAYNKIT PPCRIKVERG EELLIA