Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Huta_2526 |
Symbol | |
ID | 8384830 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhabdus utahensis DSM 12940 |
Kingdom | Archaea |
Replicon accession | NC_013158 |
Strand | + |
Start bp | 2592461 |
End bp | 2593303 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644973602 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_003131423 |
Protein GI | 257053590 |
COG category | [R] General function prediction only |
COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0560563 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAACCG TTCTCGTTAC CGGCGCTGGC TCCGGGATCG GTCGGGCGAC AGCCCGCCAG TTCTCCGACG ACGGCTGGCA GGTCTACGCC GTCGACGTCG ACGCCGACGG ACTCGGGGAC CTCGACGGCT GTGAGACCGC CACCCTGGAC GTGACCGACA GTGCCGCACT CGACCGGCTT TACGACCGGA TCAGCGCCGA GGCCGGCGGC CTCGATTGCG TGGTCGCCAA CGCCGGGTAC TGTCAGCCGG GGCCGCTCGA GGACCTGCCG GCGGAGCGCC TCGACCGGCA GTTCGCCGTC AACGTCCACG GGACACTCCG GACCATCACC ACTGGACTGC CCTTGCTACG GGAGCGAGAC GGGACGGCCG TCGTCGTTTC GAGCACGCAC GGCCGCGTGG TCACGCCCGG CATGGGCGCG TACGCGGGAT CAAAACATGC AATCGAGGGA GTGGCCGACA CTCTCCGGAT CGAGGTCGCC GATCAGCCCG TCGACGTGGC ATTGGTTGCA CCCGCCTGGG TGGACACCGA CTTCAGTGCC GAGTCAGATC ATCTCCTGTC CGGGTTCGAG CGGTCAGACC GGTACGCGGA TATCTACGAC GCACTCGAAG GGCAAGCACT GCTCGGTGGC GGGCCGCTGG CCGTCTCGCC CGAACGCGTC GCGGCGGCGA TCCAGGACGC CGCGACTGCG GATGATCCGG CTGCCCGGTA TCCCGTCGGC CTGCCGGCCA GGCTGGTGCT GGCGACGCGC TGGCTCCCGC GGCCCGTTCA GGACCTGGGC CAACGAGTAG CGATCCGTAC GCTCGCAGCC ATCGAACGCT TTCGGGAGGC GATCGACGGA TGA
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Protein sequence | METVLVTGAG SGIGRATARQ FSDDGWQVYA VDVDADGLGD LDGCETATLD VTDSAALDRL YDRISAEAGG LDCVVANAGY CQPGPLEDLP AERLDRQFAV NVHGTLRTIT TGLPLLRERD GTAVVVSSTH GRVVTPGMGA YAGSKHAIEG VADTLRIEVA DQPVDVALVA PAWVDTDFSA ESDHLLSGFE RSDRYADIYD ALEGQALLGG GPLAVSPERV AAAIQDAATA DDPAARYPVG LPARLVLATR WLPRPVQDLG QRVAIRTLAA IERFREAIDG
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