Gene Huta_2526 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_2526 
Symbol 
ID8384830 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand
Start bp2592461 
End bp2593303 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content69% 
IMG OID644973602 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_003131423 
Protein GI257053590 
COG category[R] General function prediction only 
COG ID[COG4221] Short-chain alcohol dehydrogenase of unknown specificity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0560563 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAACCG TTCTCGTTAC CGGCGCTGGC TCCGGGATCG GTCGGGCGAC AGCCCGCCAG 
TTCTCCGACG ACGGCTGGCA GGTCTACGCC GTCGACGTCG ACGCCGACGG ACTCGGGGAC
CTCGACGGCT GTGAGACCGC CACCCTGGAC GTGACCGACA GTGCCGCACT CGACCGGCTT
TACGACCGGA TCAGCGCCGA GGCCGGCGGC CTCGATTGCG TGGTCGCCAA CGCCGGGTAC
TGTCAGCCGG GGCCGCTCGA GGACCTGCCG GCGGAGCGCC TCGACCGGCA GTTCGCCGTC
AACGTCCACG GGACACTCCG GACCATCACC ACTGGACTGC CCTTGCTACG GGAGCGAGAC
GGGACGGCCG TCGTCGTTTC GAGCACGCAC GGCCGCGTGG TCACGCCCGG CATGGGCGCG
TACGCGGGAT CAAAACATGC AATCGAGGGA GTGGCCGACA CTCTCCGGAT CGAGGTCGCC
GATCAGCCCG TCGACGTGGC ATTGGTTGCA CCCGCCTGGG TGGACACCGA CTTCAGTGCC
GAGTCAGATC ATCTCCTGTC CGGGTTCGAG CGGTCAGACC GGTACGCGGA TATCTACGAC
GCACTCGAAG GGCAAGCACT GCTCGGTGGC GGGCCGCTGG CCGTCTCGCC CGAACGCGTC
GCGGCGGCGA TCCAGGACGC CGCGACTGCG GATGATCCGG CTGCCCGGTA TCCCGTCGGC
CTGCCGGCCA GGCTGGTGCT GGCGACGCGC TGGCTCCCGC GGCCCGTTCA GGACCTGGGC
CAACGAGTAG CGATCCGTAC GCTCGCAGCC ATCGAACGCT TTCGGGAGGC GATCGACGGA
TGA
 
Protein sequence
METVLVTGAG SGIGRATARQ FSDDGWQVYA VDVDADGLGD LDGCETATLD VTDSAALDRL 
YDRISAEAGG LDCVVANAGY CQPGPLEDLP AERLDRQFAV NVHGTLRTIT TGLPLLRERD
GTAVVVSSTH GRVVTPGMGA YAGSKHAIEG VADTLRIEVA DQPVDVALVA PAWVDTDFSA
ESDHLLSGFE RSDRYADIYD ALEGQALLGG GPLAVSPERV AAAIQDAATA DDPAARYPVG
LPARLVLATR WLPRPVQDLG QRVAIRTLAA IERFREAIDG