Gene Huta_2523 details

Gene Information

• Locus tag: Huta_2523
• Symbol: rps4p
• ID: 8384826
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halorhabdus utahensis DSM 12940
• Kingdom: Archaea
• Replicon accession: NC_013158
• Strand: -
• Start bp: 2590203
• End bp: 2590712
• Gene Length: 510 bp
• Protein Length: 169 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 644973598
• Product: 30S ribosomal protein S4P
• Protein accession: YP_003131420
• Protein GI: 257053587
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0522] Ribosomal protein S4 and related proteins
• TIGRFAM ID: [TIGR01018] ribosomal protein S4(archaeal type)/S9(eukaryote cytosolic type)

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.0154222
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCACTCG GTTCCAACAC CAAGTTCTAC GAGACGCCCA ACCACCCCTT CCAGGGCGAA 
CGGATCGCCG ACGAGCAGAG TCTCATCGGC CAGTACGGCC TCAAAAACAA GGAGGAACTC 
TGGCGAGCGC AGTCGGAGCT TCGTTCCTAC CGGCGTGAGG CCCGGAAGCT GCTGGGTGGC 
GGTGGCACGG CAGAGGAAAG CGAGGAGTTC ATCGCGCGAC TCAAGCGCTA CGGTATCCTC 
GACGAGGGCG ACGCCCTGGA CGACGTGCTG TCGCTCGACG TGACGGACGT CCTCGAGCGT 
CGTCTTCAGA CGGTCGCCTA CCGAAAGGGG CTGGCCAACA CGGCCCAGCA GGCCCGCCAG 
TTCATCAGCC ACGGCCACGT CACCGTCGAC GGTGAGCGGG TTTCGATCCC CTCGAAGACG 
GTCGCCGTCG AGGAAGAGGG CGCCATCGAA TTCGACGAGA ACAGCCCACT CGCCGACGAC 
CTCCACCCCG AGCGCGCGGA GGAACGATAA 

 

Protein sequence

MALGSNTKFY ETPNHPFQGE RIADEQSLIG QYGLKNKEEL WRAQSELRSY RREARKLLGG 
GGTAEESEEF IARLKRYGIL DEGDALDDVL SLDVTDVLER RLQTVAYRKG LANTAQQARQ 
FISHGHVTVD GERVSIPSKT VAVEEEGAIE FDENSPLADD LHPERAEER